Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0789 ATGGGCAAAGGAGGAATGTCAATTGTTGATCATGGAGATGGTGAAGAACAGAACATGGCTGCTTGGCTTGTTGCTATTAACACTCTCAAGATTCAACCTTTTAATCTTCCTTCTATTGGACCCCATGATGTCAGAGTTAGAGTAAAAGCTGTTGGTATATGTGGGAGTGATGTTCACTACCTCAAGACACTGAGATGTGCAGACTTTATAGTTAAAGAGCCAATGGTTATTGGACATGAGTGTGCTGGGATCATAGTAGAAGTTGGCAGTCAGGTAACGAGTTTGGAGCCTGGTGACCGTGTGGCAATTGAGCCCGGGATCAGTTGTTGGCGTTGTGATCCCTGCAAACAAGGTCGGTATAATCTATGCCCTGATATGAAGTTTTTTGCTACTCCACCGGTTCATGGTTCTCTTGCGAATCAGATAGTGCATCCAGCAGATCTTTGTTTTAAACTACCACAGAATGTGAGCTTGGAGGAAGGGGCAATGTGTGAACCCTTAAGCGTTGGCGTTCATGCTTGTAGGCGAGCAAATATTGGACCTGAGACAAATGTATTGATCATGGGTGCAGGACCCATAGGACTTGTTACACTGCTTGCAGCTCGCGCTTTTGGAGCACCTAGGATTGTCATTGTGGATGTAGATGACCATCGTTTATCTGTTGCTAAGAATCTCGGTGCCGATGATATTGTTAAAGTTTCAACAAACATTGAGGATGTTGCTGATGAAGTTATACAGATACACAAGGCTATGGGAGCTGGTATTGATGTTACTCTTGATTGTGCCGGTTTTAACAAAACCATGTCAACAGCACTGAATGCTACTCAGGCAGGTGGCAAAGTTTGCCTAGTGGGAATGGGCCATTCTATAATGACAGTCCCACTCACCCCAGCTGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGCTATAAGAACACATGGCCTCTTTGCCTTGAGTTTCTGAGGAGTGGCAAAATCGATGTAAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAAAAGGAAGTGGAAGAAGCCTTCGAAACAAGTGCTCGCGGGGGTAATGCCATTAAAGTCATGTTCAATCTTTAG 1095 0.4457 MGKGGMSIVDHGDGEEQNMAAWLVAINTLKIQPFNLPSIGPHDVRVRVKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIVEVGSQVTSLEPGDRVAIEPGISCWRCDPCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPQNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTLLAARAFGAPRIVIVDVDDHRLSVAKNLGADDIVKVSTNIEDVADEVIQIHKAMGAGIDVTLDCAGFNKTMSTALNATQAGGKVCLVGMGHSIMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0789 364 PANTHER L-IDONATE 5-DEHYDROGENASE 13 364 - -
Lan13g0789 364 PANTHER SORBITOL DEHYDROGENASE 13 364 - -
Lan13g0789 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Lan13g0789 364 SMART PKS_ER_names_mod 24 362 IPR020843 GO:0016491
Lan13g0789 364 CDD sorbitol_DH 20 363 IPR045306 GO:0016616
Lan13g0789 364 Gene3D - 169 309 - -
Lan13g0789 364 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
Lan13g0789 364 Gene3D - 28 351 - -
Lan13g0789 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Lan13g0789 364 SUPERFAMILY GroES-like 19 190 IPR011032 -
Lan13g0789 364 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0789 Lan-Chr13 8376883 8380484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0789 31 297 Monolignol Biosynthesis Gene Families AT4G37980 27.338 5.28e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0789 K00008 - gmx:100820630 672.544