Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0786 ATGGCTGTTGCCAAGAGCAACAGCAGCAGCGAACCGTCTACTTCATACAAGTGTTATAAAGTAGCAGGCTTGACTGGAACCATATTAGACACAAATCATACCTCTAATTTGAAAGATAGATACATTCTCGGGGAGCAGTTAGGTTTGGGACAGTTTGGTGTCATCCGAGCTTGCTCCGACAAGCTGACAGGAGAGGTTTTGGCCTGCAAATCAATAGCGAAAGATAGGTTGGTTACTGCGAATGATCTGAGGAGTGTCAAACATGAAATTGAGATAATGGCTACGCTATCTGGGCACCCGAATGTTGTGGACCTCAAAGCAGTTTATGAGGAGGAAGGTTATGTCCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTCTTTTACCGATTAGAGAAGCATGGGCGGTTTTCTGAATCTGAAGCCAGGATTCTATTTAGGCACCTAATGCAGGTTGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATCTGAAGCCAGAAAACATTCTTTTAGCAACAAAAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGTCTTGCAACCTACATCAAGCCTGGACAAAGTTTGCATGGATTAGTTGGAAGTCCATTCTATATTGCTCCCGAGGTACTGGCAGGTGCATATAACCAAGCCGCTGATGTATGGAGTGCTGGTGTTATTCTTTACATTCTATTGAGCGGGATGGCTCCATTTTGGGGGAAGACCAAGTCACGGATATTTGAAGCTGTTAAGGCTGCTGACCTGAGGTTCCCACCGGATCCTTGGGATCGCATTTCGGTATCTGCTAAGGAATTGATCAGGGGAATGCTCTGTACAGAAGCTTCTAAAAGGCTCACTGCCGAGGAGGTTTTAGATCATTGCTGGATGCAAAGCAATCAAAGTAATCCTGAACAACTAAGTGAACATAGAATTCAAAGTTGTGAAGAATGGGATGTCGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCGAGGAACCAGGACATCAGTTTTGGCGCTGGATCGCCTGCTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTTTTCTTTTGTGGAACCAGTGACACCTTGTTTAGTCTCTGGTGGCTTTTCATTTCAAAGTGCAAGCGATTCCACAAGTTTAGAATTTTCTTCTCCTGTTCCCTCAATGCTTAGCTTTTCATTTCTCAGCCCCAGTCCTGTTGTTGAGCAAAAGAGTTTTAAATCAAAGTGCTCGACGAACACTTCAGATGTTAATACCGTTGCTGGAGAAGCAAGCTTGGGAAAGTTGCTTTTACTACCAGATTCTACCGTTTGCTCTGGAAAGGATGTTAAAGAAACGGATCACAAACCCATTGAGACTAAATGGGCAGGTGGAACGAATGGATATAATAGGGTATTGGGAATCCACAGCAAGAGAAACCGAACAATTGGACTTGGTGAGCACGAGCAACTTGACCTTGTGGTGACTGAATCAGTGATCCGTTGGTCATCGTGCACGCAACTCTCTACATCATTGAGATTGTCTCTTGTCTGCTGA 1557 0.4419 MAVAKSNSSSEPSTSYKCYKVAGLTGTILDTNHTSNLKDRYILGEQLGLGQFGVIRACSDKLTGEVLACKSIAKDRLVTANDLRSVKHEIEIMATLSGHPNVVDLKAVYEEEGYVHLVMELCAGGELFYRLEKHGRFSESEARILFRHLMQVVLYCHENGVVHRDLKPENILLATKASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMAPFWGKTKSRIFEAVKAADLRFPPDPWDRISVSAKELIRGMLCTEASKRLTAEEVLDHCWMQSNQSNPEQLSEHRIQSCEEWDVGGSSFSASFMSRNQDISFGAGSPACDAQSPTFTCRSSFFSFVEPVTPCLVSGGFSFQSASDSTSLEFSSPVPSMLSFSFLSPSPVVEQKSFKSKCSTNTSDVNTVAGEASLGKLLLLPDSTVCSGKDVKETDHKPIETKWAGGTNGYNRVLGIHSKRNRTIGLGEHEQLDLVVTESVIRWSSCTQLSTSLRLSLVC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0786 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 515 - -
Lan13g0786 518 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0786 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lan13g0786 518 CDD STKc_CAMK 40 298 - -
Lan13g0786 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0786 518 Gene3D Transferase(Phosphotransferase) domain 1 127 332 - -
Lan13g0786 518 SUPERFAMILY Protein kinase-like (PK-like) 38 380 IPR011009 -
Lan13g0786 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0786 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 515 - -
Lan13g0786 518 Gene3D Phosphorylase Kinase; domain 1 42 126 - -
Lan13g0786 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0786 Lan-Chr13 8328775 8331947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0786 28 306 EF-hand Containing Proteins AT1G74740 51.254 1.95e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan13g0786 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0786 - - lang:109338501 909.442