Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0774 ATGAATTTGATTTTTGCTTCTTTATATATTGTTAATGGGACTAATCTGCAGGAAAGGAAAATGGAAGGTAGCAATGACTTGAGTCTTCTAGGTGAGAACTTCGACCTAGGGGTGGTTAAGGATGATGACAACGAAAGCCGGTCTGGAAGTGACAATCTTGATGGTGTATCTGGTGATGATCAAGATGCTGGTGAGGAGTCGTCTGGGTCTCAAAGGAGGAAGAAGTATCATAGGCACACTCCTCAACAAATTCAGGAGCTTGAAACATTCTTCAAGGAGTGCCCACACCCCGACGAAAAGCAAAGAACTGAACTTGGTAATAAGCTTGGCTTGGCCAACAAGCAAGTGAAGTTCTGGTTTCAGAATAGGCGTACTCAAATGAAGACTCAATTGGAGCGCCACGAGAACATGATGCTCAGGCAGGAGAATGAGAAGCTTCAAGCTGAGAATAGTTTGATGAAAGAGGCAATGGTGAACCCGATGTGTCAAACATGTGGTGGCCCATCCCTCCCTGGTCAGGTTTCATTTGATGAGCACCAAGTTGGGATTGAAAATGCTCGACTTAAGGATGAGTTAACCCGCATATGTACCTTAGCAAACAAGTTCATTGGAAGAACACTATCACCATTAGTTGGTCCCGCGGCTCTTCAGTCCCCAACTTCTGGTCTAGACCTTGCTATTGGAATGAATGGATTTGCTGGTCCAAGCAACCATGGCATGATGAACTTGCCAATGGGGCTTGATTTCGGAGAAGGACTTTTGAACACTCAACCTGTCATGAATGGGATTATTAGATCACCACCAATGGGACAAACAGGAAATCAAATACCGAATGAGAAAGCGATGCTTATAGAAGTTGCAATGGTTGCTATGGAAGAATTGATTAAGATGGCTCAACTAGATATCCCTCTATGGTTTAAGAGTCTGGATGGCAATAAGGAAGTATTGAATCATGAGGAGTATGCAAGGATTATGGTTCCTCCTTGTATTGGCCCAAAACCCAATGGTTATGTGACTGAAGCTACTAGAGAATCTGGTTTAGTGATAGGCAATTGTCTAGGCCTTGTGGAAATATTGATGAACGTGGATCAATGGTCAGAGAGTTTTCCCTCTGCAGTTGCTAGAGCTGTCACTCTCGAAGTAGTATCCAGTGGGGTATCCGGCAATAGAAATGGAGCTATACATGTGATACAAGCCGAAGTTCAATTGCCTTCGCCGCTTGTCCCGGTTCGTCAATTGACCTTCATCAGGTATTGCAAGCAGCATGGTGAAGGTTTATGGGCAGTGGTTGATGTTTCAGTTGACATTGGTCAAAATTCTACCAATTTTGCAAACCCAATAATGAACTGCAGGAGGCTCCCTTCTGGATGCATTCTGCAAGACACATCCAATGGCTTTTTCAAGGTGACTTGGGTGGAGCATAACCAATATGATGAAAGCGCGATTCATCATCTTTATCGTCCGTTGATTAATTATGGAATTGGCTATGGTGCTCAAAGATGGGTTGCTTCTCTCCAGAGGCAATTCGAATGCTTGGCGACTCTTGTACCCTCTCCCATCCCAATTGAGGACCCTACAGGCATGACCCTAGCTGGTAAGAGAAGCATGGTGAAGCTCGCGCAACGAATAACCAATAAATTCTTCAGTGGCGTATGTTTTTCAACTGCGCACCAGTGGGAGCCCCTTCATTTTGATGTTATGGATCCGAACATTAAAGTGATGGGCAGGAAAAATGTGGTTGGTGAGCCATCTGGCATTGTGTTGAGTGCTGCTACCTCTGTTTGGATGCCTGTTTCGCAGCAAAGGTTGTTCGATTTCCTTCACGATGAACGATTGAGAGGGGAGTGGGATGTCTTGTCCAACAATGTCCCAATGCAAGAGTTGCTTCGAATTTCCAAGGGACAAGTAAATGGAAATTGTGTCTCTGTCCTTAGCAATGGTCCTAAAGGCTTGGAAAGTCGCATGCTGGTTCTGCAAGATGCATGGACAGATAGCTCTTCATCAGTGATGGTTTATGTAGCAGTGGATATGGATTCCTTGAACTTGGTGATGAGTGGTGGAGAATCTGCATATCTTCATCTCTTGCCTTCAGGCTTTATTATCCATCCAGATGGTCGTTCAAACAATGGAAGTAGTAGCAATGGCGTCGGCCTCGGCGGCAGTGAAAGTGGTGGCAGCTTGCTTACATTTGGGCTACAAATTTTATCGAGTAACCTCCCAAATGATAACAACCTTTCCATGGAGTCAGTTGTTTCTGTTAGCAACCTCATCACAGAGAGCATTCGTAAGATCAAGGTTGCACTTAGAGTTGCATAA 2316 0.4456 MNLIFASLYIVNGTNLQERKMEGSNDLSLLGENFDLGVVKDDDNESRSGSDNLDGVSGDDQDAGEESSGSQRRKKYHRHTPQQIQELETFFKECPHPDEKQRTELGNKLGLANKQVKFWFQNRRTQMKTQLERHENMMLRQENEKLQAENSLMKEAMVNPMCQTCGGPSLPGQVSFDEHQVGIENARLKDELTRICTLANKFIGRTLSPLVGPAALQSPTSGLDLAIGMNGFAGPSNHGMMNLPMGLDFGEGLLNTQPVMNGIIRSPPMGQTGNQIPNEKAMLIEVAMVAMEELIKMAQLDIPLWFKSLDGNKEVLNHEEYARIMVPPCIGPKPNGYVTEATRESGLVIGNCLGLVEILMNVDQWSESFPSAVARAVTLEVVSSGVSGNRNGAIHVIQAEVQLPSPLVPVRQLTFIRYCKQHGEGLWAVVDVSVDIGQNSTNFANPIMNCRRLPSGCILQDTSNGFFKVTWVEHNQYDESAIHHLYRPLINYGIGYGAQRWVASLQRQFECLATLVPSPIPIEDPTGMTLAGKRSMVKLAQRITNKFFSGVCFSTAHQWEPLHFDVMDPNIKVMGRKNVVGEPSGIVLSAATSVWMPVSQQRLFDFLHDERLRGEWDVLSNNVPMQELLRISKGQVNGNCVSVLSNGPKGLESRMLVLQDAWTDSSSSVMVYVAVDMDSLNLVMSGGESAYLHLLPSGFIIHPDGRSNNGSSSNGVGLGGSESGGSLLTFGLQILSSNLPNDNNLSMESVVSVSNLITESIRKIKVALRVA* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0774 771 Gene3D - 59 147 - -
Lan13g0774 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 35 769 IPR042160 -
Lan13g0774 771 ProSiteProfiles START domain profile. 276 514 IPR002913 GO:0008289
Lan13g0774 771 CDD homeodomain 73 130 IPR001356 GO:0003677
Lan13g0774 771 Pfam Homeodomain 73 128 IPR001356 GO:0003677
Lan13g0774 771 SMART START_1 285 511 IPR002913 GO:0008289
Lan13g0774 771 Coils Coil 124 159 - -
Lan13g0774 771 ProSiteProfiles 'Homeobox' domain profile. 70 130 IPR001356 GO:0003677
Lan13g0774 771 SUPERFAMILY Homeodomain-like 62 130 IPR009057 -
Lan13g0774 771 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 35 769 - -
Lan13g0774 771 MobiDBLite consensus disorder prediction 38 81 - -
Lan13g0774 771 SUPERFAMILY Bet v1-like 279 512 - -
Lan13g0774 771 SMART HOX_1 72 134 IPR001356 GO:0003677
Lan13g0774 771 CDD START_ArGLABRA2_like 280 510 - -
Lan13g0774 771 SUPERFAMILY Bet v1-like 539 733 - -
Lan13g0774 771 Pfam START domain 287 510 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0774 Lan-Chr13 7935719 7939772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0774 22 768 Homeobox Transcription Factor Family AT3G61150 47.906 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan13g0774 START 9.2e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0774 K09338 - gmx:100785102 933.71