Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0761 ATGGTGGAAAAAGCAAAAGCAAAATACAGAAAGGGGTTATGGTCACCTGAAGAGGACAATAAGCTCACAAATCATATCCTTATGTTTGGTCATAGTTGCTGGAGCTCTGTCCCCATTAAGGCAGGGTTGCAAAGGAATGGAAAAAGCTGCAGACTAAGGTGGATAAACTACCTAAGGCCAGGATTAAAGAGAGGGGTTTTCAGCAAACAGGAAGAGGAGACAATCATGTCCTTTCATAACATGTTAGGAAACAAATGGTCTCAAATAGCACAACATTTGCCGGGAAGAACAGACAATGAGATAAAAAACTTCTGGCATTCATATTTGAAAAAGAAAGTAGAGAAAGCTAAAGAAATTGAATCTCATAAACAAATTCATTATGGCACCTCAAGCTCAGATACAATAGACTATTCACTCTCTCCCCAGAAACTTGCAACTCAAGATTATCCACAAAACATAGAGAAATCAGCATCACATTGTGATCATTCTTATCCACAAAGTTATAACTTTTCCAAGGAAGCTTGTAATAGCTCATTACCAAAAGTGTTATTTGCTGAGTGGCTTTCATTGGATCATGTAAATGGTGGGAGCTCTATAAACTCAGATGATTCTTTATTAGGGAATGGATTTGATCAAAATTCAAGTTTCCAAGAAACTCTAATGCAGATTTCAGAAGGACCCTTTGGTGGAGAGTATCATAATAGTATTATAACTAGTTCAACCACTGAGGTGTATAATTCAAAGCTTAAGTTTTCAAATCAAGTGAATGGAAGTGACTTCATTCATTATGTCCATGGAGCTGATTTATATAGCAATTTCAGCCTCAACAATGATACAATGTATATATGA 849 0.364 MVEKAKAKYRKGLWSPEEDNKLTNHILMFGHSCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKQEEETIMSFHNMLGNKWSQIAQHLPGRTDNEIKNFWHSYLKKKVEKAKEIESHKQIHYGTSSSDTIDYSLSPQKLATQDYPQNIEKSASHCDHSYPQSYNFSKEACNSSLPKVLFAEWLSLDHVNGGSSINSDDSLLGNGFDQNSSFQETLMQISEGPFGGEYHNSIITSSTTEVYNSKLKFSNQVNGSDFIHYVHGADLYSNFSLNNDTMYI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0761 282 CDD SANT 14 58 IPR001005 -
Lan13g0761 282 CDD SANT 67 109 IPR001005 -
Lan13g0761 282 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lan13g0761 282 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Lan13g0761 282 SMART sant 63 111 IPR001005 -
Lan13g0761 282 SMART sant 10 60 IPR001005 -
Lan13g0761 282 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Lan13g0761 282 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Lan13g0761 282 PANTHER MYB DOMAIN PROTEIN 55 2 276 - -
Lan13g0761 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lan13g0761 282 Gene3D - 66 133 - -
Lan13g0761 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Lan13g0761 282 PANTHER MYB TRANSCRIPTION FACTOR 2 276 - -
Lan13g0761 282 Gene3D - 13 63 - -
Lan13g0761 282 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0761 Lan-Chr13 7692639 7695851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0761 4 232 MYB Transcription Factor Family AT3G48920 46.581 2.42e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan13g0761 Myb_DNA-binding 4.4e-10 CL0123