Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0746 ATGGGAGATGCAGAGAGTTGCAATATTAGAGTTTTAAATTCTGGGTGGAATCATGTTAACCATATTATTAAGGTTGAAGCTTACAACGAGGTTGTTAGTAGACTTAAGGAATTGAATGTACCTGAGGTTTTTCTTCCTGGTTTTGAAGATGAACTTTGGATGCACTTTAATCGCCTTCCTATTAGATATGTAAGGTATGCACTTGACATGAAGGTGGATAGGGCCAAAGATATTCTTATGCATAAAAGGTTATTGCATATGGCAGGAGCTTCTCCTTTTGCTATTGCACCTGCAGTTGAAGTCAATCTTGTGCAGGTCCATTCTGCTTCTGGTGTGCATTGTAGCAATTCCCTTCACTCAATTTCACAAAGAGAAATCACTTCTCAAGATTCTGATATTCCTGGCATGAGGGCAATGCATGAAATCACAATTTCAACAAATGATAAGCCAAAACTTTTCAGACAGTTAACTTCCTTACTGTCTGAGACTGGGCTTGACATTCAAGAAGCACATGCTTTTTCCACATTGGATGGATATTCATTGGATGTTTTTGTTGTTAGTGGTTGGGCACTTGAGGAGACAGAGAAGCTAAAACATGTTCTTACAAGTAAAATTCATAAACTCGAGCAGCATTGGTTGAAAGAAAGCAGTGTTCCTATAAAGAAACTAGAGAAAACTGGTATCAATTTTAAGCATGAAAATTTGTCCATTGGTGGAAATAATGCCTGGGAAATTGATGCAAGCTGTTTGAGATATGTGAAGAAAATTGCATCTGGGTCTTTCAGTGATGTGTATAAAGGTACCTACTGCAATCAAGATGTAGCTATCAAAGTCCTTAAGAATGGAAATCTGAATGAAAATATACAGAGGGAGTTTTCTCGAGAAGTGTATATCCTGAGAAAAATTAAGCATAAAAATGTTATTGAATTAATTGGTGCCTGTACTATACCCTCAAGCCTTTACATTGTCACAGAATATATGTCTGGTGGAAGTATGTATGACTTTCTGCATATACAGAAGGCTGTACTTACTCTTTCATCTTTGCTCAAAGTAGCAATTGATGTTTCTGAAGGACTACATTGTTTGCATAATCATGGTATTATACATCGAGACCTTAAATCCGCGAATCTTTTGATGGATGGGAAAGGGGTAGTTAAGATTGCTGATTTTGGCGTAGCTAGATTGCTAGATCCGACTGGTATCATGACTGCAGAAACTGGAACTTATCGGTGGATGGCTCCAGAGGTCATTGAACATAATCCATATAGTCACAAAGCCGATATTTTTAGCTTTGGGATTATTCTTTGGGAGCTGCTCACAGGAAAGCTTCCTTATGAGCATTTGTCTCCATTGCAAGCAGCAGTTGGAGTGGTTCAGAAGGGTTTGAGGCCTGAAATTCCAAGAGATACTCATCCAAAACTAGTGGAATTGCTTCACCAATGCTGGCAGCAAGATCCATCTGTGAGACCAGATTTCTCAGAAATTCTGAAATTTCTGCAGCATTTTAGAAACATGGTTGAAGGGAAGAGGAAGGTGAAGGCAAAGATAATGCATGAGAAAGAATAG 1566 0.3844 MGDAESCNIRVLNSGWNHVNHIIKVEAYNEVVSRLKELNVPEVFLPGFEDELWMHFNRLPIRYVRYALDMKVDRAKDILMHKRLLHMAGASPFAIAPAVEVNLVQVHSASGVHCSNSLHSISQREITSQDSDIPGMRAMHEITISTNDKPKLFRQLTSLLSETGLDIQEAHAFSTLDGYSLDVFVVSGWALEETEKLKHVLTSKIHKLEQHWLKESSVPIKKLEKTGINFKHENLSIGGNNAWEIDASCLRYVKKIASGSFSDVYKGTYCNQDVAIKVLKNGNLNENIQREFSREVYILRKIKHKNVIELIGACTIPSSLYIVTEYMSGGSMYDFLHIQKAVLTLSSLLKVAIDVSEGLHCLHNHGIIHRDLKSANLLMDGKGVVKIADFGVARLLDPTGIMTAETGTYRWMAPEVIEHNPYSHKADIFSFGIILWELLTGKLPYEHLSPLQAAVGVVQKGLRPEIPRDTHPKLVELLHQCWQQDPSVRPDFSEILKFLQHFRNMVEGKRKVKAKIMHEKE* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0746 521 Gene3D Phosphorylase Kinase; domain 1 243 328 - -
Lan13g0746 521 Coils Coil 191 211 - -
Lan13g0746 521 Gene3D Transferase(Phosphotransferase) domain 1 329 521 - -
Lan13g0746 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Lan13g0746 521 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 107 501 - -
Lan13g0746 521 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 135 - -
Lan13g0746 521 ProSiteProfiles ACT domain profile. 141 215 IPR002912 -
Lan13g0746 521 CDD STKc_MAP3K-like 256 499 - -
Lan13g0746 521 Pfam Protein tyrosine and serine/threonine kinase 251 499 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 501 - -
Lan13g0746 521 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 135 - -
Lan13g0746 521 PRINTS Tyrosine kinase catalytic domain signature 324 337 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 PRINTS Tyrosine kinase catalytic domain signature 361 379 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 PRINTS Tyrosine kinase catalytic domain signature 407 417 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 PRINTS Tyrosine kinase catalytic domain signature 426 448 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Lan13g0746 521 SMART serkin_6 250 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0746 521 ProSiteProfiles Protein kinase domain profile. 250 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0746 521 SUPERFAMILY Protein kinase-like (PK-like) 240 499 IPR011009 -
Lan13g0746 521 SUPERFAMILY ACT-like 138 212 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0746 Lan-Chr13 7481620 7489164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0746 5 502 MAP Kinase Kinase Kinase AT4G35780 50.832 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan13g0746 PK_Tyr_Ser-Thr 2.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0746 - - aprc:113864606 662.529