Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0743 ATGGCGGATCAGGGCTCCAATGAAGGCTCGACTTCTGACAATGTTTCAGCCGAGTCTTCAGATTCAACTCTTCAGCTCAATATCAAGACTCTTGATTCCCACATCTATAGTTTTGAAGTGGACAGAAATATGTCGGTTTCATCATTCAAAGAGAAAATTGCCAATGAAACAGGTGTTCCAACGAGCCGGCAACGACTGATATTTAGAGGAAAAGTATTAAAGGATGAGCACCTTCTTCTTGAGTATCATCTCGAAAATGGACATACGTTGCATTTAGTTGAAAGGCAACCAAATCAGTCACAGGTTTCCGGTACGAGTTCTGCTGAGCCAACTGTTACAAATGTTAACCAAGGAAATGATGCTGGCTCGGGGGTTCCTCGTAATCGTGTTGGGACGATTTCACACAGTGTTGTTCTCGGGACTATTAATATGGAGGAACAAGGTGACAGCATGGTTCCTGACCTTAATAGGGTTATTGGGGCGGTCTTGAATTCTATTGGCATTGGTGGCCAGAACAGAAGTAGTGTTTCTAATGCTACACAAACTTCAGCTTCATCAGGGAGTGAAACTGAAGGTATACATGCTGGAAATTGGAACCTAGCTGGAAATCAAGCACAGTCTGGACAGACATTTCATGGTCAGGCATTCCAGTCTCTTCCTCAAGTTGTTCAGATTCCTGTTCCTGCGGGGGCCATACCTATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGAACACACTGTCTGAGTTTATAAATAGCATGGAACACACACTATCACAAAATGGTCATCGACCGAATCTGTCTTCAACTAACCCCAGAGATCAACAACTAGAATTGCCAACCAACGCACAAGGGTTGCCTACTATTGAAGCATTAAGCACCGTTGTGCATCACACAGAACAATTGCTCAGTGATCATGTTGTTGCTGCTTTATCTCATATTGCAGGACGCTTGGACCGAGACGGAACATCTTCTGATTTAAGTATAAGGGGTCAAATTCAGTCAGAATCAGTGCAAACAGGACTTGCTATGCAGCATTTAGGTGCACTTCTTCTCGAGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTATGCAGAATCTGCTGTTAATGCTGGACCAGCAGTTTATATTTCACCATCAGGACCGAATCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCTCCCTCTTTAGTGGTCCTGTTCCTTCAACTCCTCCAACATCTGGCGCTGTTGGTATTGGAAGTGTTCCTAGGAACGTAAACATCCATATACATGCTGGTACCTCTCTTGCACCAATTATTTCATCAATTGGTTCTAGGCCAAATAATGGAGAAGGGATAGGAGGTGAACTCCATAGTGAGCCTGGCTCTGGTGTTGGAGTTGCTAGCAGCACACAAACTGGGTTTGGTCTTTCTACTTCACAGCCACCTTCTGATCCAACTCCATTGTCATCATCAGTTTTAGATGAAATCAATTCTCGCCTTAATAACATTCTTGGTGATATGCAAGGAGATATCACAGATCTGTCAGGTGAATCAACTGGTCCGCACTTGCCTGCCAGTTCTGAATCACGGCCTGCACCGGGAAACGAACAGCTGGGTACCATGGACGTGAATGGCTTTGGGGTATCTTCGGTTGGTTGTACTTCTGAAAGTGGAGTACAGAAGCCCCAATCAGAGGCAGTCCAAACCTGTTGTAGTGATGAGAGAGACGATTCAGTTGACAAGTTTGTTTCTGATCAAGTTTCTTCAAGGGGAGAAACAATAACAAAATCAGAAAAAGTACAAGGTGCTCCATCTGTAAGTGAAGAACAAGATGCAACTGAACCTGCCAAAGCTGCTCCATTAGGATTGGGCATGAGTGGTCTGGAGCGTAAAAAGCGATCTCGCCCTCAACCTCCTGCAGGCAAGGGTGCTGGTGGTGAACCATCTAGTTCTTCTGCCAATCAAAGTCAGCAAACTAGAACAGATGGTCAACAAATATTGCAAGCTCTTGCCAGTCATGGATCTGCTCTGAATTTGAGAAATCCTAACGGGCCATCCCAGCAGCCCTTGCCCTCTGGTGATAACCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCATAGCCCCGCTATGAATGGTTTGTTGTCAGGGGTTTCACAGCAAACTAGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACAGAATCCTCAGATGATGAACACAGTCAATGAAATTGCTGAACAGGTTGGCGGCGAGGATATAGGAAATATGTTTGCTGGAATGGAAAGAGGGCAAGGTGGCGGTATTGACTTGTCAAGGATGTTTCAACAGATGATGCCAGTTGTATCTCGAGTCCTTGGTGGGGGAAGTCCTCCCCCACTCTTCTCTGCAGCAGAACCACAGCCCCAGGCGTCCCACAGAGATGAAAATTCTTATAATCGAAGTTTACAGCTTGACCTTCAACCAGTGGTAGAGAGGATTGAGCGGCTGAGTCCACCTATGGATGTTTTCCGTGCTGTTGCTGAAAATGCTATCCATGTATCTGGCAATGGAAGTGCTTCTAATGATCTTCTGGACGAGTTATGCAGCAATGAGAGTCTTGTTGGTGAATATGTGAAGATGTTACGAAATGATGTAAAGCAACGATACAAGGGACATTCTGAGTTGGACAAGTCCTAA 2697 0.4512 MADQGSNEGSTSDNVSAESSDSTLQLNIKTLDSHIYSFEVDRNMSVSSFKEKIANETGVPTSRQRLIFRGKVLKDEHLLLEYHLENGHTLHLVERQPNQSQVSGTSSAEPTVTNVNQGNDAGSGVPRNRVGTISHSVVLGTINMEEQGDSMVPDLNRVIGAVLNSIGIGGQNRSSVSNATQTSASSGSETEGIHAGNWNLAGNQAQSGQTFHGQAFQSLPQVVQIPVPAGAIPIPSLNAPIPHSLNTLSEFINSMEHTLSQNGHRPNLSSTNPRDQQLELPTNAQGLPTIEALSTVVHHTEQLLSDHVVAALSHIAGRLDRDGTSSDLSIRGQIQSESVQTGLAMQHLGALLLELGRTMLTLRMGQSYAESAVNAGPAVYISPSGPNPIMVQPFPLQTSSLFSGPVPSTPPTSGAVGIGSVPRNVNIHIHAGTSLAPIISSIGSRPNNGEGIGGELHSEPGSGVGVASSTQTGFGLSTSQPPSDPTPLSSSVLDEINSRLNNILGDMQGDITDLSGESTGPHLPASSESRPAPGNEQLGTMDVNGFGVSSVGCTSESGVQKPQSEAVQTCCSDERDDSVDKFVSDQVSSRGETITKSEKVQGAPSVSEEQDATEPAKAAPLGLGMSGLERKKRSRPQPPAGKGAGGEPSSSSANQSQQTRTDGQQILQALASHGSALNLRNPNGPSQQPLPSGDNQIDMAGLMSQVLHSPAMNGLLSGVSQQTRVDSPDGLRNMLQQFTQNPQMMNTVNEIAEQVGGEDIGNMFAGMERGQGGGIDLSRMFQQMMPVVSRVLGGGSPPPLFSAAEPQPQASHRDENSYNRSLQLDLQPVVERIERLSPPMDVFRAVAENAIHVSGNGSASNDLLDELCSNESLVGEYVKMLRNDVKQRYKGHSELDKS* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0743 898 MobiDBLite consensus disorder prediction 99 129 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 584 608 - -
Lan13g0743 898 PANTHER OS07G0498800 PROTEIN 6 894 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 512 534 - -
Lan13g0743 898 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Lan13g0743 898 CDD Ubl_ubiquitin_like 26 93 - -
Lan13g0743 898 Gene3D - 11 108 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 507 662 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 170 205 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 798 818 - -
Lan13g0743 898 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Lan13g0743 898 MobiDBLite consensus disorder prediction 676 697 - -
Lan13g0743 898 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 894 - -
Lan13g0743 898 PRINTS Ubiquitin signature 34 54 IPR019956 -
Lan13g0743 898 PRINTS Ubiquitin signature 55 75 IPR019956 -
Lan13g0743 898 PRINTS Ubiquitin signature 76 97 IPR019956 -
Lan13g0743 898 MobiDBLite consensus disorder prediction 542 569 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 647 662 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 676 694 - -
Lan13g0743 898 SMART ubq_7 24 95 IPR000626 GO:0005515
Lan13g0743 898 MobiDBLite consensus disorder prediction 99 123 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 446 491 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 1 22 - -
Lan13g0743 898 MobiDBLite consensus disorder prediction 463 491 - -
Lan13g0743 898 SUPERFAMILY Ubiquitin-like 18 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0743 Lan-Chr13 7421307 7432578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0743 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 4.43e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0743 - - lang:109325669 1725.68