Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0741 ATGGAGAATCAAAAAATAGACCCAAGAAGTGGTTTCAACAGTTCCAACTCAACCTACTACAGCAAACGCAAACCACTCCCACTCCCTCAAAACCATTTTCTAGACGTAACCACCTTCATCTCCTCCCACTCCCACCACGGCAACGTCGCCTTCATCGACTCCGCCACAAACCGCCACTTCACCTTCCGCCAACTCTGGCTCGCCGTCGACTCCGTCTCCTCCTCCCTCTCCTCTACCGGAATCCGAAAAGGCGACGTCGTTCTTCTCCTATCACCTAATTCCATCTACTTCCCCGTCGTTTGCCTCTCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCTCTCAACACGGCCAATGAAATTGCGAAACAGATTAATGATTCTAAACCTGTTCTCGCTTTCACTACCTCTCAACTCATCAATAAAATAACCGCTTCTTCACCGAACCTTCCAATTATTCTCATCGAAGAAAATGAAGAACTTCAACAAGGTGGAGTTATTGACACGCTTCACAACTTGATGAAGAAAGAACCGTCGGTTAACCGAGTCAAGGAGCGAATTAACCAGGACGATACAGCCACTCTTTTATACTCTTCTGGCACAACTGGACCAAGCAAAGGCGTTGTTTCTTCACACAGGAACTTAATCTCTATGGTGCAAATTGTTCAAAGTAGGTTCAAGAGCGATGATTTACAAACTTTCATATGCACTGTGCCGATGTTTCATATCTACGGTTTAATAGCATTTGCAACTGGAATTCTAGCTTTGGGTTCAACGGTTGTAGTGCTATCGAAATTCGACATGCATGAAATGCTTTTCTCGATTGAGAAGTTTCGTGCTACGTATCTTCCTCTGGTGCCGCCAATTTTGGTTGCGATGCTGAACAACGCGGAGGCCATTAGGGCGAAGTATGATCTGAGTTCTTTGCATTCGGTGTTATCCGGTGGAGCACCGCTGAGTAAGGAAGTGATAGAAGGGTTTGTGGAGAAGTATCCTAACGTGTCGATTTTGCAAGGGTATGGGTTAACGGAATCTACTGGTGTTGGTGCTTCTACGGATTCGTTGGAAGAGAGTAGAAGGTACGGTACGGCGGGGCTTTTGTCTCCGGCTACGGAGGGTAAGATTGTTGACCCTGAATCTGGGGAGGAGCTGCCGGTTAACCGGACCGGTGAGCTTTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAATGCAGAAGCAACTGCATCAACCCTTGATTCACAGGGATGGTTAAAAACAGGGGATCTTTGCTACGTTGATAATGATGGATTCATATTTGTTGTTGATAGGTTGAAGGAGCTCATTAAATACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAAGCCTTGTTGCTTACCCATCCTGCTATTTTAGATGCTGCTGTTATACCGTACCCAGATAGAGAAGCTGGACAGATTCCATTTGCATATGTGGTGAGGAAGGATGAAAGTAGCTTATCAGAAAATGAAGTTATGGATTTTATTGCAAAACAGGTGGCACCTTACAAAAGAATCAGAAGAGTGGCGTTTACATCTTCTGTACCCAAAAACCCATCTGGTAAAATTCTTAGGAAGGATCTCATTAAGCTCGCAACATCTAAACTTTGA 1641 0.4558 MENQKIDPRSGFNSSNSTYYSKRKPLPLPQNHFLDVTTFISSHSHHGNVAFIDSATNRHFTFRQLWLAVDSVSSSLSSTGIRKGDVVLLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTANEIAKQINDSKPVLAFTTSQLINKITASSPNLPIILIEENEELQQGGVIDTLHNLMKKEPSVNRVKERINQDDTATLLYSSGTTGPSKGVVSSHRNLISMVQIVQSRFKSDDLQTFICTVPMFHIYGLIAFATGILALGSTVVVLSKFDMHEMLFSIEKFRATYLPLVPPILVAMLNNAEAIRAKYDLSSLHSVLSGGAPLSKEVIEGFVEKYPNVSILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATEGKIVDPESGEELPVNRTGELWLRGPTIMKGYFSNAEATASTLDSQGWLKTGDLCYVDNDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDREAGQIPFAYVVRKDESSLSENEVMDFIAKQVAPYKRIRRVAFTSSVPKNPSGKILRKDLIKLATSKL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0741 546 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Lan13g0741 546 Pfam AMP-binding enzyme 44 448 IPR000873 -
Lan13g0741 546 PANTHER BNAA06G14440D PROTEIN 8 545 - -
Lan13g0741 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 545 - -
Lan13g0741 546 SUPERFAMILY Acetyl-CoA synthetase-like 44 543 - -
Lan13g0741 546 Gene3D - 18 443 IPR042099 -
Lan13g0741 546 Gene3D - 444 545 IPR045851 -
Lan13g0741 546 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Lan13g0741 546 CDD 4CL 28 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0741 Lan-Chr13 7396448 7400307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0741 6 546 Monolignol Biosynthesis Gene Families AT1G20500 64.674 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0741 K10526 - gmx:100811344 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0948 7 9144997 9149130 Lan13g0741 13 7396448 7400307 LSH
Lan8g1092 8 14226081 14231352 Lan13g0741 13 7396448 7400307 LSH
Lan13g0741 13 7396448 7400307 Lan8g1092 8 14226081 14231352 PCT
Lan8g1092 8 14226081 14231352 Lan13g0741 13 7396448 7400307 PCT