Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0736 ATGAAGGGTGGGAAATCGAAAACCGAGACCAAGAGAGCTGATCCCAAGCTTGCTGTGAATAAGAAGGGTGCTGCTGCTGCGAAACCGGCAAGGAAACCGGCTAAGGGGAAGGCTGCTAAAGACCCTAACAAGCCTAAGAGGCCTGCCAGTGCCTTCTTCATTTTCATGGAGGAGTTTAGGAAGCAGTTCAACAAAGAAAATCCTGAGAACAAAGCTGTCTCTGCTGTTGGCAAGGCTGCTGGAGCCAAATGGAAGTCCATCTCTGATGCTGAGAAAGCACCATATGTGGCAAAGGCAGAGAAACGGAAAGTGGAGTATATGAAGAATATGAGAGCCTATAACAACAAACAGGCTGAAGGCCCTGCTGCTGCAGATGAAGAAGAATCTGAGAAATCAATTTCAGAGGTGAATGACGAAGATGATGGTGATGATGATGGAAGTGATGAGGATGATGATGATGATGATGATGACGATGAGTAG 480 0.4667 MKGGKSKTETKRADPKLAVNKKGAAAAKPARKPAKGKAAKDPNKPKRPASAFFIFMEEFRKQFNKENPENKAVSAVGKAAGAKWKSISDAEKAPYVAKAEKRKVEYMKNMRAYNNKQAEGPAAADEEESEKSISEVNDEDDGDDDGSDEDDDDDDDDDE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0736 159 Gene3D High mobility group box domain 28 130 IPR036910 -
Lan13g0736 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 153 IPR031061 -
Lan13g0736 159 Coils Coil 96 116 - -
Lan13g0736 159 MobiDBLite consensus disorder prediction 131 159 - -
Lan13g0736 159 SMART hmgende2 44 115 IPR009071 -
Lan13g0736 159 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lan13g0736 159 MobiDBLite consensus disorder prediction 1 18 - -
Lan13g0736 159 SUPERFAMILY HMG-box 36 118 IPR036910 -
Lan13g0736 159 MobiDBLite consensus disorder prediction 112 159 - -
Lan13g0736 159 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lan13g0736 159 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 153 - -
Lan13g0736 159 CDD HMGB-UBF_HMG-box 45 111 - -
Lan13g0736 159 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0736 Lan-Chr13 7316397 7319003 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lan13g0736 HMG_box 1.8e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0736 K25507 - lang:109352139 204.527