Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0718 ATGGACAAGGGAACACCACCTAGCCTCTTTGTTAATGATGGTTCGTTCTTGGAGAGGTTCAAGCAACTTCAACAAGAGCAAGAGAAGGGGAAGAATGCCAAATTAGAGGAGTCTAAGCCTATTAAAGTTGCTTCAGGGTCCTTGGCTTCTAATCCCTCCATCCGTAAGGCTAATGACACACAAAAAACTCCCCAGGCTGCTTCTGGTGGCAAACTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCACCCCCTGTTAATTTAGCTGATGACGATGAAGAAGAAACAGGTGCCACAGATGCTTCAAATGATGCACCACCAAAACGGCAAAAATTGGGTCAGGCAGATGGCACTGAGCAATCATTGAGACAACTTGATGTTGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAGCTAGCAAGTTTTGTGGCAAAAAATGGACGGCAGTTTGAAGATGTTACACGCCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATGAAAAATGTGCTGATTACAAATATTATGAATACCGGCTTGCTCAAGAGGATAAGGCTCTTGCACAGTCCAGGGAACCACAGGCATATGGGACTGTTTTATCTGCAGGGGGTACAAGCATTTCATCTTTCAGACCATCAAATGGTCCTCAGAAATCATCTCATCAACATTCAACCTACCAAATTCCTGCTTCTGTTTTATATGATCGTGCTGAAGAACCATGGTCTGCTGGATCTTCAGTTCAAGCATCATCAGCTGGAAATACTAATGAACCCAGTGGATCATCAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGAGCTGCACAGGAAGAGAGGTCGAGACGACCTAAGCATTCAAAAGATGAGATGCCCCCTCCAGCTTCTCTTCAAACAGCTTCTGGGAAAAAAGGCCATCACATGGGTGATTACATTCCCCTAGAAGAACTAGAGAAGTTCATGGCTAACTGTAATGATGCAGAAGCCCAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTTGGCAGCTCCAGGAAGGGTATTGCAGATCCTATTATGGCAGGCAGTGTTAAGAAAGATAACTTGGGGGTTGGGGCTGTCCAACCTGGGGAGGTGACTCCTGAAGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGCTATCGTCACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1314 0.4422 MDKGTPPSLFVNDGSFLERFKQLQQEQEKGKNAKLEESKPIKVASGSLASNPSIRKANDTQKTPQAASGGKLAFSLKQKSKLVPPPVNLADDDEEETGATDASNDAPPKRQKLGQADGTEQSLRQLDVAPSSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYEYRLAQEDKALAQSREPQAYGTVLSAGGTSISSFRPSNGPQKSSHQHSTYQIPASVLYDRAEEPWSAGSSVQASSAGNTNEPSGSSNADSLALMEFYMKRAAQEERSRRPKHSKDEMPPPASLQTASGKKGHHMGDYIPLEELEKFMANCNDAEAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0718 437 MobiDBLite consensus disorder prediction 286 300 - -
Lan13g0718 437 Coils Coil 327 347 - -
Lan13g0718 437 MobiDBLite consensus disorder prediction 252 272 - -
Lan13g0718 437 Gene3D Surp module 91 197 IPR035967 GO:0003723|GO:0006396
Lan13g0718 437 SUPERFAMILY Surp module (SWAP domain) 126 191 IPR035967 GO:0003723|GO:0006396
Lan13g0718 437 Pfam G-patch domain 355 398 IPR000467 GO:0003676
Lan13g0718 437 MobiDBLite consensus disorder prediction 44 68 - -
Lan13g0718 437 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Lan13g0718 437 MobiDBLite consensus disorder prediction 286 317 - -
Lan13g0718 437 MobiDBLite consensus disorder prediction 24 38 - -
Lan13g0718 437 SMART G-patch_5 352 399 IPR000467 GO:0003676
Lan13g0718 437 MobiDBLite consensus disorder prediction 24 139 - -
Lan13g0718 437 MobiDBLite consensus disorder prediction 207 233 - -
Lan13g0718 437 ProSiteProfiles G-patch domain profile. 354 401 IPR000467 GO:0003676
Lan13g0718 437 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Lan13g0718 437 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 437 IPR040169 -
Lan13g0718 437 MobiDBLite consensus disorder prediction 115 132 - -
Lan13g0718 437 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Lan13g0718 437 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0718 Lan-Chr13 7074467 7081301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0718 350 437 C2H2 Transcription Factor Family AT5G26610 33.981 4.45e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0718 K13096 - gmx:100786213 654.44