Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0696 ATGGAAAGAATGTATTCATCTCTTATTTTTCTTTTATTTTGCCTTTGTGACATTTCTGTCATTGAGGGTTTTGGCTTCAGTGTGGACCTCATCCACCGTGATTCTCCAAAATCACCATTTTATATTCCCAGCGAAACTCATTATGAGCGAGTTGCTAAAACTATTAGTCGTTCCATTAACTATGCCAATCGTTTCGACAAACATTCTTTTTCCACAAAAAACGTTGAGTCTAACGTGCTTCCTAATGAAGGTGACTACCTCATGAGTTACTCGATTGGCACACCGCCAGTCAAAATCTTAGGTATTGCTGATACTGGTAGTGACATTCTTTGGTTGCAATGCGAGCCTTGTAACCCTTGTTCCCCACAAACCACTCCAATCTTTGACCCTTCAAACTCCACAACATATGAAAAGATTCCTTGCACTTCTAATGCATGTCAATCTGTGAGCGGAACCTCTTGCTCTTCTCGAGGCAGTCAACAAAGTTGCCAATATAGTATTGGATATGGGGATGGTTCACAATCTCAAGGGGATCTTAGTATGGATACAATTACTTTAAGTTCCACTAAGGGCTCTACTGTCTCATTTCCTAAAACTGTTATTGGATGTGGAACCAGGAACACTCTAGGTAATCAAGGTGCAGGCTCTGGCATAGTTGGTCTTGGAAATGGACCTGTTTCACTCATAACTCAACTTGGTTCATCAATACAAGGAAAATTCGCCTACTGTTTGGGGCCAACACTTTCAAGGACTAAGTTCCCAAGCAAACTCACCTTTGGAGAAGATGCTGTGGTTTCTGGTGTTGGTACTGTCTCAACTCCATTGTTCCTAGATAAAGTTTTTTACTTCCTAAACTTAGAGGCGTTCAGTGTCGGAAATAAAAGAGTGGAATTTGGAAGATCTTCCTCTAGTCCTGGTGGATCTAGTAACATCATAATTGACTCTGGTACAACATTGACTTTTTTACCCAAGACTGTTTACTCTGAGTTAGAATCAACGGTCGCAGCTTTGATAAAATTGGAGCGTGTTAAATCCCCTTTACCACCATTGAACCTTTGTTACAAAGCTCCATCGGGTGACAATTTGGAGGTTCCAGTGATCACAGCACATTTTAGTGGCGCAGATATCAAGTTGAATGCTCTTAACACTTTTACTCAAGTTATTGAAGATACTATATGTTTTTCTTTTGTCCCAACTAACCAACTTGTTTCCATCTTTGGAAATTTGGCACACCAAAACTTTTTAGTTGGCTATGACATTCAAAAGAAAACTCTCTCATTCAAGCCTACTGATTGCACAAAATAG 1305 0.3992 MERMYSSLIFLLFCLCDISVIEGFGFSVDLIHRDSPKSPFYIPSETHYERVAKTISRSINYANRFDKHSFSTKNVESNVLPNEGDYLMSYSIGTPPVKILGIADTGSDILWLQCEPCNPCSPQTTPIFDPSNSTTYEKIPCTSNACQSVSGTSCSSRGSQQSCQYSIGYGDGSQSQGDLSMDTITLSSTKGSTVSFPKTVIGCGTRNTLGNQGAGSGIVGLGNGPVSLITQLGSSIQGKFAYCLGPTLSRTKFPSKLTFGEDAVVSGVGTVSTPLFLDKVFYFLNLEAFSVGNKRVEFGRSSSSPGGSSNIIIDSGTTLTFLPKTVYSELESTVAALIKLERVKSPLPPLNLCYKAPSGDNLEVPVITAHFSGADIKLNALNTFTQVIEDTICFSFVPTNQLVSIFGNLAHQNFLVGYDIQKKTLSFKPTDCTK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0696 434 Gene3D Acid Proteases 63 259 IPR021109 -
Lan13g0696 434 SUPERFAMILY Acid proteases 82 432 IPR021109 -
Lan13g0696 434 Gene3D Acid Proteases 260 434 IPR021109 -
Lan13g0696 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 1 433 - -
Lan13g0696 434 CDD pepsin_A_like_plant 86 432 IPR034161 -
Lan13g0696 434 ProSiteProfiles Peptidase family A1 domain profile. 86 428 IPR033121 -
Lan13g0696 434 Pfam Xylanase inhibitor N-terminal 86 260 IPR032861 -
Lan13g0696 434 Pfam Xylanase inhibitor C-terminal 282 428 IPR032799 -
Lan13g0696 434 PANTHER OS07G0603500 PROTEIN-RELATED 1 433 - -
Lan13g0696 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0696 Lan-Chr13 6402274 6403594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0696 75 434 Miscellaneous Gene Families AT1G44130 25.326 1.01e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0696 - - gmx:100789696 489.574