Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0692 ATGGCTATAGCTGCAGAGTCTCAGTTCCATGTTTTGGCCGTCGATGACAGCCGTATCGACCGAATGCTGATCGAGAGGCTCCTTAAAACCTCTTCCTTTCATGTTACTACAGTGGATTCTGCTACTAAGGCTTTGAAAATTCTTGGTTTGGTTGAAGATGATTTGAGGAATTTTGACACTAATGTTGCTTCAAAATTTCACCAGGATGTTGAAGTAAACATGATCATAACAGATTATTGTATGCCAGGAATGACTGGCTATGATCTTCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTTGTGATTATGTCCTCAGAAAATGTTCCATCAAGAATCAACAGATGCTTGGAAGAGGGTGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTGAACAAACTCAAGCCTCATTTGTTGAAATCAAGAGTTAAGGAAGAACAAGACCAACCCATCAACAACAAAAGAAAGGGCATGGAAGAAAGTTACTCACCAAATAAAAACAGACAAAAAATGTAG 534 0.382 MAIAAESQFHVLAVDDSRIDRMLIERLLKTSSFHVTTVDSATKALKILGLVEDDLRNFDTNVASKFHQDVEVNMIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSRVKEEQDQPINNKRKGMEESYSPNKNRQKM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0692 177 MobiDBLite consensus disorder prediction 141 177 - -
Lan13g0692 177 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 175 - -
Lan13g0692 177 SMART REC_2 9 144 IPR001789 GO:0000160
Lan13g0692 177 CDD REC_typeA_ARR 11 140 - -
Lan13g0692 177 MobiDBLite consensus disorder prediction 139 177 - -
Lan13g0692 177 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Lan13g0692 177 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Lan13g0692 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 175 IPR045279 GO:0009736
Lan13g0692 177 SUPERFAMILY CheY-like 8 148 IPR011006 -
Lan13g0692 177 Gene3D - 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0692 Lan-Chr13 6253336 6255176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0692 1 162 Response Regulator Gene Family AT3G57040 66.061 6.58e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan13g0692 Response_reg 4.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0692 K14492 - gmx:100787436 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0758 7 6608248 6609676 Lan13g0692 13 6253336 6255176 LSH
Lan13g0692 13 6253336 6255176 Lan4g1252 4 20844166 20848541 PCT