Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0689 ATGACCTATTCAATCTCTTCTTTCTTCTCACATCAGCACTCACTGATCAACTACCGTGACTCTCACTCAGTTGAGGGTTTCATGGCCTCTCAAAATGAAAGTGGGAGTTCAACCAAAACTACCCCATCTTTGCCAAAGAATATATACAAAGATCCAGATGATGGGCGGCAACGGCTTTTGCTTGAATTGGAATTTATTCAATGCCTTGCCAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGGTTTCATTGAATACTTAAAGTATCTTCAGTATTGGCAGCGACCTGAATACATTAAATTTATTATGTATCCTCATTCCCTCTATTTCCTTGAGCTTCTTCAGAATGCAAATTTCCGCAATGCAATGGCACATCCCAACAATAAGGAACTGGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGTCTAAAACACCTGTTACCGAGGTCACTTCCTGAAACTAGTGCCACACCCGCACCTCCTGCTCCTACCTCAACTTCAAACCAGATGCCCCTGCCTGCACTGCCACCGGCGCCAACTACAAATGTCACGGTGACAGCATCATCTACTCGAGCTCCATCTCCAATGCCATATGGCATACCCCCTGGGTCTACCATTCCGAAAAATGAAATGAGAAATTCTGCAGTTGAGAAAAGGAAAAGAAAGTGA 702 0.4302 MTYSISSFFSHQHSLINYRDSHSVEGFMASQNESGSSTKTTPSLPKNIYKDPDDGRQRLLLELEFIQCLANPTYIHYLAQNRYFEDEGFIEYLKYLQYWQRPEYIKFIMYPHSLYFLELLQNANFRNAMAHPNNKELAHRQQFYFWKNYRNNRLKHLLPRSLPETSATPAPPAPTSTSNQMPLPALPPAPTTNVTVTASSTRAPSPMPYGIPPGSTIPKNEMRNSAVEKRKRK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0689 233 MobiDBLite consensus disorder prediction 30 45 - -
Lan13g0689 233 MobiDBLite consensus disorder prediction 165 189 - -
Lan13g0689 233 MobiDBLite consensus disorder prediction 190 204 - -
Lan13g0689 233 Pfam SOH1 57 149 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lan13g0689 233 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 45 146 IPR038089 -
Lan13g0689 233 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 36 233 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lan13g0689 233 MobiDBLite consensus disorder prediction 30 49 - -
Lan13g0689 233 MobiDBLite consensus disorder prediction 162 233 - -
Lan13g0689 233 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 36 233 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Lan13g0689 Med31 8.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0689 K15153 - gmx:100527879 310.457