Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0673 ATGTCAGAGTATCTTCCACAAGCACTGGTGGAACAAATTCTTCTGAAGCTCCCACCAATCACACTAGTGAGGTTAACTTTAGTATCCAAATCATGGCAATGTTTCATTCAAAGCGATTATTTTATCTCCTTACACCTTCAAAATTCCCCATCTTCACTTCTCTTATGCATTTCTACAAACACCTTATCTGCACAATGGTCCCTTACCAATATCAATCCCTTTCCTTCCCCCACAATTACAAGACTTCCACCCCTATTTCCTGTTGCTCTTTCTTCTTTGTTCCTCTTTATCCAATCCCTTAACGGTGTCGTTTGTCTCATCCAAAAATTGTTCCTTCCTCAACAAGCTATCATACTCTGGAACCCTTCTATTAGGAGACACCTTATACTCCAAATTCCACCAATTGAAGACATTGTGGCTCTTGGGTTTGGGTTTGATTCCAAGAACAATGATTTCAAATTGATCAAGTTGTTTAACCCTGATCTTCAGGTGGAGATTTATTCCCTCAATGAGGGTTCTTGGAGGGGTATTGATTTCTCAATTCGACAAGAATTAGGGTTGGTTAGGTTTTCAGACACGCGGTGTTTTGTAAATGGGTATGTGCATTGGATTGCAGAGTATAGTACTCAAGAAGGCCGTAAGGTGTTACTATTGAAGTTTGATGTGGAGAAAGAGAAGTTTGGGAAGATGAAGCTTCCGCGAAAATTGGTTATGGTACCATTTTCAAGAATGGAAGTTACTGTTATTGAAGGTTGTCTCTCCATGTTACTTTACGATGGCGTGCCACCATTGCAAGGTAGTAATGGTTGGTGTGACATATGGATGATGAGAGAGTATGGTGTGGCTGAATCGTGGATTAAGATTGGCAAGGTTCATTTGCCAGATGGAGGATATGTATTTGGAGTGAGTACAAGTTCTAATGTTTTTGTGAATTGGTCAAATTGGTCTGGTATAGAATTCAGCTCACTGCATTCCTTAGATCCCAACACTCAGGAGGTTACAGATATCGGGATTCCAGGTAGAGCGATCACCGCGTGCGAATACACAGGGAGCTTGGTTTTACTTAACAAAACATGA 1077 0.4076 MSEYLPQALVEQILLKLPPITLVRLTLVSKSWQCFIQSDYFISLHLQNSPSSLLLCISTNTLSAQWSLTNINPFPSPTITRLPPLFPVALSSLFLFIQSLNGVVCLIQKLFLPQQAIILWNPSIRRHLILQIPPIEDIVALGFGFDSKNNDFKLIKLFNPDLQVEIYSLNEGSWRGIDFSIRQELGLVRFSDTRCFVNGYVHWIAEYSTQEGRKVLLLKFDVEKEKFGKMKLPRKLVMVPFSRMEVTVIEGCLSMLLYDGVPPLQGSNGWCDIWMMREYGVAESWIKIGKVHLPDGGYVFGVSTSSNVFVNWSNWSGIEFSSLHSLDPNTQEVTDIGIPGRAITACEYTGSLVLLNKT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0673 358 PANTHER AND ASSOCIATED INTERACTION DOMAINS-CONTAINING PROTEIN, PUTATIVE ISOFORM 1-RELATED 5 355 - -
Lan13g0673 358 Pfam F-box associated 196 310 IPR006527 -
Lan13g0673 358 SUPERFAMILY F-box domain 3 56 IPR036047 GO:0005515
Lan13g0673 358 SUPERFAMILY Galactose oxidase, central domain 161 354 IPR011043 -
Lan13g0673 358 ProSiteProfiles F-box domain profile. 1 44 IPR001810 GO:0005515
Lan13g0673 358 PANTHER OS09G0372900 PROTEIN-RELATED 5 355 - -
Lan13g0673 358 SMART fbox_2 5 45 IPR001810 GO:0005515
Lan13g0673 358 TIGRFAM F_box_assoc_1: F-box protein interaction domain 98 302 IPR017451 -
Lan13g0673 358 Pfam F-box domain 5 41 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0673 Lan-Chr13 5769270 5770601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0673 148 285 Carbohydrate Esterase AT1G25141 26.573 3.76e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0673 - - lang:109363373 721.85