Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0662 ATGTCACCATTTCCTTCTTCCTTTGATGAATTTATCCTCACAAGCTCCCCCGACGGCCCTATCGTCGCCTATGAAGCTTCCACCGGCGCCACCTACACACGGTTCAGCGACAGTAGATCACCGCGCCGTGGCCTCACCATGGTTAACCAAGGACTCATTGCAGTATCTCATGTGTTTTCAGAAACTGGTGCAGGTTCAGTCCAAATCTACAATTGGCATATTTCAAATGTCTTCAACAACTTCCCTCTTCCTGAACCAGTTGCACCACTCGTTGCTACTTCTGATGGTGCTTTTCTCTTTGTGGGTGGTCTCTCTGGAACCATTCATTCTCTCTCAATCCCTTCTGGGAATCTCATCAATTCTCTTTCTCTTCACTCAAAACCTATCTCTACTCTTCATCTCAATGATGATGGCTCGCTTGTAATATCAGGTAGTAATGATGGGGTGATAGTTATGATCCCAAGTTTTAAGCTTGTTGAGGAAGGATCTTATTCATTAGCTGAAGATGATTCAAGAGATTTTATATTGCACCAGTGGAAGGCACATTCTGATTCAATCACTGCTTTGAAATCTGGGGTAGGAGTTTGTAGATCTACATTGATCTCTTGCTCACTTGATTGCACATGCAAAATTTGGGATATGTCAAATGGAGTTCTGATACAAACAGTGGCATTCCCTTATGCCATTTTTGGGGTAGCAGTAGATTCAAGAGAGTCAAGATTTTATGCTGCTGGTGAAGATGGGTTGGTTTATATGGGTTCAATGAATAGAAAAATGATAGATAAAGGGTATGAATTGTTTACTAGTTCTAAATGTCATAATGGGTCAATTGTGTCTTTGGTTTTGGTAAATGAAGGTAAGGATTTGGTTTCTGCTTCAGAAGATGGTAGTGTTTGGAAATGGGATGTTATGAATGGAGAAGTTACTATGGTTCTTGGAAATAATAATGACAAGAGAAGCATGATTAGTGATATGATAGTGGCAAAAAGAGATAGAAATTATGGAGTTATAATGGAAAATGATGTTGTTGGAGGCAGTGAAATCAATGGCTTTAATTCTTCTTATTCTTCTTGTTTTTCTTCTTCTAGGCTATATGATGAAAAGGTAGTTACAAATCTCATGCAAATAACAGATTTTGGACAAGTGTTGGATGTGATAGTAGAGGACAAGAAAAAAGCTATTAACATGTTAGAATCTGCAATTGAGATGTATGAGAGGCTATTGAAACTTATCCTTAAAGAAGCTATGAGAGGTATTGGTGGTAGTAACGATGATGAAGATGCAGAAAAACAAGGAGACAAAGAGCAAGAGGAAGAAGAGAAAGAAAATGACAAGTAA 1338 0.3886 MSPFPSSFDEFILTSSPDGPIVAYEASTGATYTRFSDSRSPRRGLTMVNQGLIAVSHVFSETGAGSVQIYNWHISNVFNNFPLPEPVAPLVATSDGAFLFVGGLSGTIHSLSIPSGNLINSLSLHSKPISTLHLNDDGSLVISGSNDGVIVMIPSFKLVEEGSYSLAEDDSRDFILHQWKAHSDSITALKSGVGVCRSTLISCSLDCTCKIWDMSNGVLIQTVAFPYAIFGVAVDSRESRFYAAGEDGLVYMGSMNRKMIDKGYELFTSSKCHNGSIVSLVLVNEGKDLVSASEDGSVWKWDVMNGEVTMVLGNNNDKRSMISDMIVAKRDRNYGVIMENDVVGGSEINGFNSSYSSCFSSSRLYDEKVVTNLMQITDFGQVLDVIVEDKKKAINMLESAIEMYERLLKLILKEAMRGIGGSNDDEDAEKQGDKEQEEEEKENDK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0662 445 PANTHER OS09G0477800 PROTEIN 6 424 - -
Lan13g0662 445 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 307 IPR011047 -
Lan13g0662 445 SMART WD40_4 263 302 IPR001680 GO:0005515
Lan13g0662 445 SMART WD40_4 115 154 IPR001680 GO:0005515
Lan13g0662 445 SMART WD40_4 216 254 IPR001680 GO:0005515
Lan13g0662 445 SMART WD40_4 172 213 IPR001680 GO:0005515
Lan13g0662 445 MobiDBLite consensus disorder prediction 419 438 - -
Lan13g0662 445 Gene3D - 5 152 IPR015943 GO:0005515
Lan13g0662 445 ProSiteProfiles Trp-Asp (WD) repeats profile. 270 311 IPR001680 GO:0005515
Lan13g0662 445 MobiDBLite consensus disorder prediction 419 445 - -
Lan13g0662 445 Gene3D - 155 383 IPR015943 GO:0005515
Lan13g0662 445 ProSiteProfiles Trp-Asp (WD) repeats profile. 122 152 IPR001680 GO:0005515
Lan13g0662 445 Pfam WD domain, G-beta repeat 117 150 IPR001680 GO:0005515
Lan13g0662 445 Pfam WD domain, G-beta repeat 176 213 IPR001680 GO:0005515
Lan13g0662 445 PANTHER WD-REPEAT PROTEIN 18 6 424 IPR045227 -
Lan13g0662 445 Coils Coil 387 414 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0662 101 303 U-box Gene Family AT1G04510 27.358 4.81e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0662 K14829 - gmx:100785191 431.795