Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0633 ATGGCACTGAGCACTTACTTGAATATGGACTTGGATTTTCACCAACCTCCCAACTCAAAAATGAGCACAATTGCACCACAACTACTTGCACCAGAACACCACAACTACCCAATTTATCATCAAGATGAAAGCTTCTCCCTTCCAAAAACTAATGTTGATCCTTATTTTGCCCAAACAAGTTTTCTTTACCCAGAAATCTACCCTCACCTCCTTCCTTATAACGACCCTGTCATCTCACTCTCTGATATCTTCCCTACTGAAGAAGATCATTGCAATAACCTCCTTCAATGCCCAAAACGCCAAAAGTGTTTCTATGAAGAACTAGAGCAGTCTCCAAACAACAACTTCATTGATGGTTTTGTCCCAAATGATCCATTTCCAGAAGAGGAACTAGTACTACCACTATCAGAACAACAACTCTTCTTTGATGCAATACCAAACTTTCAAGTTCCACAACTTCCCCAAGATAATATTATTAGGGCATATGGTGCTGGTTACCAATATGAGAATGAATATGAGAGGACAAGTAAGGAGAAAAATACCATATCCATGCAAAGCTTAGCGGCACGAGAAAGGAGAAGGAAGATCACTGAGAAAACACAAGAACTTGGGAAGTTGGTACCTGGTGGTTCAAGAATGAACACAGCTGAAATGCTGCATGCAGCTGGAAAATATGTTCAGTACATGCAGGCTCAAGTTCAAATGCTTCAACTTATGGACACACTTCAGGAATATAAAGCATCACCTCCAAGTGAAAATCTGCATACCCTGCTTGGCTCTCTAAGTGTTCAAGAGAAGATGTATTCAGAGAATAAGTGCATTGTTTCAAAAGATTTCATTACTACTTTGACAAATCATGCCAATCTTCAATCAAAACCTTCCATCCTTAAAGATCTTATGCAGTTGATTGGGTCTGGCATTGACTAG 927 0.397 MALSTYLNMDLDFHQPPNSKMSTIAPQLLAPEHHNYPIYHQDESFSLPKTNVDPYFAQTSFLYPEIYPHLLPYNDPVISLSDIFPTEEDHCNNLLQCPKRQKCFYEELEQSPNNNFIDGFVPNDPFPEEELVLPLSEQQLFFDAIPNFQVPQLPQDNIIRAYGAGYQYENEYERTSKEKNTISMQSLAARERRRKITEKTQELGKLVPGGSRMNTAEMLHAAGKYVQYMQAQVQMLQLMDTLQEYKASPPSENLHTLLGSLSVQEKMYSENKCIVSKDFITTLTNHANLQSKPSILKDLMQLIGSGID* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0633 308 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 299 - -
Lan13g0633 308 Pfam Helix-loop-helix DNA-binding domain 189 230 IPR011598 GO:0046983
Lan13g0633 308 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 299 - -
Lan13g0633 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Lan13g0633 308 Gene3D - 177 248 IPR036638 GO:0046983
Lan13g0633 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 240 IPR036638 GO:0046983
Lan13g0633 308 SMART finulus 186 235 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0633 Lan-Chr13 5314443 5316299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0633 145 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 38.415 7.37e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan13g0633 HLH 0.00018 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0633 - - lang:109363529 630.557