Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0625 ATGAAGCATTTCATCCGCAAGCTCTCCCGAGCCACCGATTCCTCCCGCTACACTCTCCTCCGGTCCGACCTATACACCACGCGCCGCCGCCGCCGTAACAGCGATGTCCCCGAGGGACACATCCCGGTGTACGTGGGAGAAGAGATGGAACGGTTCGTGGTGAGCGCGGAACTGCTGAACCATCCGGTTTTCCAGAAGCTTCTTAACCAGTCGGCTCAGGAATACGGTTACGAACAGAAAGGAGTTCTCCGAATTCCTTGCCACGTCATCGTCTTCGAACGAGTCCTTGAAGCGCTTCGACTCGGCCTTGACTCGCGTGAGCTTCACGATCTCATCGGTTCTTCTTCGGAAGAATTTTGTTAG 363 0.5565 MKHFIRKLSRATDSSRYTLLRSDLYTTRRRRRNSDVPEGHIPVYVGEEMERFVVSAELLNHPVFQKLLNQSAQEYGYEQKGVLRIPCHVIVFERVLEALRLGLDSRELHDLIGSSSEEFC* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0625 120 Pfam Auxin responsive protein 21 99 IPR003676 GO:0009733
Lan13g0625 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 118 IPR003676 GO:0009733
Lan13g0625 120 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0625 Lan-Chr13 5207519 5208227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0625 34 96 Calmodulin-binding Proteins AT4G34750 49.206 3.16e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0625 K14488 - pvy:116114263 156.377