Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0624 ATGGGGAAGAAACAGAAGCAGAAGATTATTCTTCCGCCGGAACTCCCACCGGAGATTCCCGACGATGAAGTTGAAGTTTCCGACGAGGATGTCCAATTCGTGAAGGACAATCGCGGCTATGCCTCCTTGCTTTCCACCCTCGACACTCAATCTATCACCAAGCATGTTACTCGAGTTGCTGATGCCAAAGAGGATACATTGGAGAAACTCTACGAGGAACGCTCACGAAAGAGTGCTCTCAAGAAAGAGAAAGAAGAAACAGGTCTCCAGGTTGATCGTGTTGATGCTCTACCCATCAAAACCTTGGATGGAAAGCTCTATTACCGGACAGCTAAGAAGACAGAACCAGAAAACGGTCCAGGTGAAGAGGAAGCTGAAGAGGACGGTAATGCAGACAAAGGTCTAATGAAGCTAACCAAGTCTGAGAGGAGAGCCAAACTTAAGAAAATGAAAAGAGAGGAGAAGAAACAAGGGAAAGAGGTGGCTAAAGCAGAAGTTCAAGAAACTCCACAAGCAGCAGTACTGGCAGAGGTAAAAGAAGATCTCACAGCTGAGGAGACATTTGATAGTAAAAAGCGTAAACTTGCAGAGTTGGGAGATTCCTTGCTAACAGACCCCGACTCCAATATTAAATTTCTGAAGGATATGCTACAGCTATGTAAAGATAATGATCCTACCATTGTCAAACTTGGACTTCTTTCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGAATTAGGCTTCCCACTGAAAAGGAAATGGAAATGAAGGTTTCAAAGACCATTAGGAAGATGCGTTATTATGAATCAACTCTTCTTTCTGCATACAAGGGGTACCTGCAAAGGCTGATGATATTAGAAAAGAAGCCCTTATTTCAACATGTTTCAGTTCGTTGTATTTGTAGTTTGCTTGATGCAAATCCCCATTTCAACTTTCGTGAAAGCTTGTTGGATGCCACTGTCAGGAACCTAAACTCCACTGATGAGGCCATAAGGAAACCTTGTTGTTCTACAATCAAGTCACTATTTACAAATGAGGGTAAACATGGTGGTGAAGCTACTGTGGAGGCTGTTCGTTTGATTGCTGATCATGTTAAGGCTTATAATTGCCAAATGCAGCCTGATTCTGTTGATGTTTTTTTGTCTCTTTCATTTTATGAGGATCTTGGGAAGCCTGAAAAGGCAGAAGAGGATCAGAAAAATAAATACAAGAAAAATAAGAAGAGAAAAAATTCTGAGGCATCAAATCAGTTGCCGGAGAATGACAGAAAGAAAAGTAGGAGAGAGTTGATCTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAATCTGCATCGTTTACGCCAGATGTTATGGAGCAGAGACAGATGCAAACTGAAACACTCTCTGCCGTATTTGAGACATACTTTCGCATTTTGAAGCATACGATGCAATCCATAGTTGCTAGGCCTGAAGCAAATTCTGGTGCATTAGCCACTGCAGTTGAGCCCCACCCACTACTTGCTTCTTGTCTTAAAGGGCTGGGAAAATTTGCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAAACATCTGAAAATTCTTGCTTCTGGCAGTATCAACCCAGGGAGCACTTCTGAGAATGGTTCTAAATGTTTGACTGTGTCGGAACGTCTCCAATGCTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGAAGCCTTGAATGTTGATTTACAGGACTTCTTTGTCCATCTTTACAATCTTATAGTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTAGCAGATGCTCTGAAGATAATGTTGTGTGACGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAACGTTTGGCAACATTGTCATTGTGCTTTGGATCTCCAGAGTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTCTTCAGAAAAATGTTAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGTGGATCAGTTGCTGGCACAATTCCAAAATATCTGCCATATTCCACAGACCCCAACTTAAGTGGTGCCTTTGCCACAGTACTTTGGGAACTCAATCTTTTGTCCAAACATTATCATCCAACTATATCTACAATAGCCTCTGGCATTTCAACCATGAGTGCTGCAAATAACCAACTCCTTCTCTCTAAGTCCTCTCCTCAACAAGCTTTTAAGGACCTGTCTCTTGAACAGGAATTAAGTTTCCCACAAGTTGGCAGCATGAAATTAAATAACAAGAGGAGAAAAACAAATCTTTCTGCTACATCATCTTCCATTGGTTCTACAACAGTTGTGAGTTCCTTCAATGAGGATGAGTTGCAAAAGAAGCTTAGTTCCCATTTTATGATTCTTCATGACATCAAGGAGAATGAAAGGTTGAGAAGTGAGTTGGATAAAACTACACAATCTCTACTGCTATATGAACAATATAAGAAACAAAAGAAGCAACGATCAAAAGCAAAAAGTAAATTATCAGCTGTTGTTTAG 2520 0.4107 MGKKQKQKIILPPELPPEIPDDEVEVSDEDVQFVKDNRGYASLLSTLDTQSITKHVTRVADAKEDTLEKLYEERSRKSALKKEKEETGLQVDRVDALPIKTLDGKLYYRTAKKTEPENGPGEEEAEEDGNADKGLMKLTKSERRAKLKKMKREEKKQGKEVAKAEVQETPQAAVLAEVKEDLTAEETFDSKKRKLAELGDSLLTDPDSNIKFLKDMLQLCKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKEMEMKVSKTIRKMRYYESTLLSAYKGYLQRLMILEKKPLFQHVSVRCICSLLDANPHFNFRESLLDATVRNLNSTDEAIRKPCCSTIKSLFTNEGKHGGEATVEAVRLIADHVKAYNCQMQPDSVDVFLSLSFYEDLGKPEKAEEDQKNKYKKNKKRKNSEASNQLPENDRKKSRRELISKTREEVEADYKSASFTPDVMEQRQMQTETLSAVFETYFRILKHTMQSIVARPEANSGALATAVEPHPLLASCLKGLGKFAHLIDLDFMGDLMKHLKILASGSINPGSTSENGSKCLTVSERLQCCIVAFKVMRNNLEALNVDLQDFFVHLYNLIVEYRPGRDQGEVLADALKIMLCDDKQHDMQKTAAFIKRLATLSLCFGSPESMAALVTVKHLLQKNVKCRNLLENDTGGGSVAGTIPKYLPYSTDPNLSGAFATVLWELNLLSKHYHPTISTIASGISTMSAANNQLLLSKSSPQQAFKDLSLEQELSFPQVGSMKLNNKRRKTNLSATSSSIGSTTVVSSFNEDELQKKLSSHFMILHDIKENERLRSELDKTTQSLLLYEQYKKQKKQRSKAKSKLSAVV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0624 839 Coils Coil 67 87 - -
Lan13g0624 839 SUPERFAMILY ARM repeat 208 649 IPR016024 -
Lan13g0624 839 Coils Coil 395 415 - -
Lan13g0624 839 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 784 IPR016903 -
Lan13g0624 839 PIRSF Noc3 1 837 IPR016903 -
Lan13g0624 839 MobiDBLite consensus disorder prediction 1 22 - -
Lan13g0624 839 Coils Coil 147 167 - -
Lan13g0624 839 MobiDBLite consensus disorder prediction 107 165 - -
Lan13g0624 839 MobiDBLite consensus disorder prediction 396 431 - -
Lan13g0624 839 MobiDBLite consensus disorder prediction 412 431 - -
Lan13g0624 839 Pfam CBF/Mak21 family 556 711 IPR005612 -
Lan13g0624 839 Pfam Nucleolar complex-associated protein 191 281 IPR011501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0624 Lan-Chr13 5189244 5197921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0624 1 808 Core DNA Replication Machinery Family AT1G79150 58.507 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0624 K14834 - gmx:100794797 1231.08