Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0602 ATGACTTCCAAAGGAGGTTCTTGTCAGATATCACAATGGAAGTATCATGTTTTTTTGAGTTTCAGGGGAGGAGACACTCGCAAAAGCTTTACAGATCACTTATATGCTGCTCTTAACAGAAAAGGCATTTTAGTTTTCAGGGATGGCGAACAACTCCTTAGAGGAGAAGTTATTTCACAACAACTTCTTCATGCAATTCAACAATCTCTCACCTCAGTTGTTGTTATCTCCCCAGACTATGCTTCTTCTACATGGTGCTTGGAGGAACTTCACAACATCCTTGAATCCACAAGAGTGTTGGGTCGCAAAGCTTTTCCCGTTTTCTACGGTGTAGATCCATCTCATGTTAGATATCAAAGTGGAAATCTTGCAGAATCTTTCAGGAAACTTGAACAAAGGTTTTCTGCTGACTTGAATAAAGTGCAAAAATGGAGAAATGCTTTGAGAGGAGTTGCCAATTTATCTGGATGGGATTCCAGAGATAGGCATGAAACGGAGCTCATTGAAGATATTGTTGGAGAGGTGTGGATAAATTTGCAACAAAAGTTGCAATCAGACAATGATGGACTAGTTGGAAATGTTTCAAGGATAAGAGAACTAGATTCACTTTTAAGTATAGAATCATTGGATGTTCGCTTCATAGGACTATGGGGTATGGGTGGAATAGGAAAGACAACTCTTGCTAGAGTTGTTTTTGACAAAATCCGTGACAACTTTGAAATTCCCTGCTTTCTTCATAATGTTAAAGAGGTTTCTAAAACACCTGATGGGTTGGTTTGCTTGCAAAGAAAACTTCTTTCTCCCCTAAAAATAAGAAACCTTGAAATTGATGATTTGTATGATGGAAAGAAGAAAATCAGAAACCTTTTATGCAACAAAAAAGTTCTTCTAGTCCTTGACAACATTAGTTCTTTAAGCCAACTAGAGAGTTTGGCTAAAAATCAAGAGTGGTTTGGTCTAGGAAGCAGAGTGATAGTGACAACAAAAGATAGGCACTTGTTGGTATCACATGGAGTATGTAAGAACTATGAGATGGAAATCTTAAACGAAAGTGATTCTTTTCAACTCTTTAGTCAAAAAGCTTTCAAAAGTGATAAACCTCCAGAACATTATTTAGAGCTAACTAAAAGTATGCTCCATTATGCTGGAGGTCTTCCCTTGGCACTTGAAGTGTTGGGTTCTTTTCTTTGTGAGAGAAAACTCTCTGAGTGGGAAGATGCTTTGGCAAAGATAAAACAAGTTCCACCGGATGAGATTTGGAAGACACTAAGAATAAGTTATGATGAATTGGAAGATGCAGAAAAGACTATGTTTCTTGACATTGCATTCTTCTTTGCGGGACAGTGGGAAGTAGAAGTGATACAAATATTGAAAGACTGTGGTCTTCATCCAACAATAGGAATAAGTCTTCTTAGTGAGAAATCACTGGTAACTTGTCAAGCAGGAACTTTGGGAATGCATGATTTGCTTCAAGAAATGGGTAAAAAAGTTGTTTTTCAAGAATCTCCAAATGATGCAAGCAGACGCAGTAGGTTGTGCTCTTTAGAAGAAGTTAATCAAGTATTGAGAAAAGCTAAGGGGACAGAATCCACTGAAGGAATAATTGTAAAGTCAAGTGACCCACATGAAGAACATTGGGACCCTGAAGCTTTCTCAAAGATGTATAATCTTAAAGTACTGATCATTTTGTGCGACTTGCACCTCCCCCTTGGCCTCAAATGTCTCTCTAGTTCGTTAAAAATCCTTGAATGGGAAAGTTGTTCTTTGCGGGAGCTACCACTTGGCTTGCCACTTGACGAACTTGTTCACTTGAAAATGCATTGCAGCAAGTTTAATCAACTGTGGAGTGGAACTAAACATTTTAGAAAGCTAAAATCAATTGATCTCACTGATTCTAGAGATCTGATTCGAACTCCAGATATTTTTGAGGTTCCATGTCTCGAAAGGTTAGTTTTGAAAGGTTGTAAAAACATTGTGGAGGTTCACCAATCTGTTGCTCAGCACAAGCATCTTCTTGAACTGAACTTGGAATGCTGCATCAATCTTAAAACCCTTCCAAGAAAACTGGAGATGGATGCATTGAAGGAGCTCATTCTTTCTGGTTGCTCACAAGTTAAAAAGCTTCCCGAGTTTGGGAAGAGCATGGTATATCTATCTATTCTTAGTTTAAAAGATTGCAAAAGTCTTATTTGTCTTCCACAGAGTATCCGCAACTTGAAATCCCTTATAAAGCTAGATATCCAAGGTTGCTCAAAATTGTTTGGGCTGCCAAATAATTTAAATGAGAACAATGTTGTGGAAGAAGTTGAAGTGAATGAAACAACAAGGAGAGAAGCACCTTTATCTCTTAGTGATTTTAAAGCTTTGGTAACATTATTATCCAAAGGATGTGATTGGTTAAGTAGCAAATCATGGAGCATATCTCTCCCTGCTGATGAAGTATTTGGTTGTAAGCAGTATCCACTTAGCATGGACCTTAAGTTTTCTCCTCTGTTAGGTTGCTCCATGTTGAAGTCATTAAATTTGGCATATTGTAATCTCAGTGATGGATCAATTCCTAATGATATTGGACAATTATCTGCACTTGAAAAATTAATTCTAAATGGGAACAATTTTGCTCACCTACCAGCATGCATTCAGAAACTTCATCGGCTAAAATGGCTTGAATTAAATGATTGCCCAAGGCTTGGGACTTTGCCTTTGCTTCCACCCGCTGTAACTTGTTTAACTTTGCAAAATTGTACTCAACTAGCACCAATATCATTTGACTCACGAAGAATATGGAACATTCTTGACGCAAGAAGACGGGAGTTGAAATATGGGTTGTGGTTCATGGTGCCAGGGAGTGAAATTCCACCATGGTTTGAGAATGAAGATTATGTTCTTGCAGAGGCAAATTTACTGGATCCTGATTATGGTGAAAAGTATGATTTTTTAGCATCAAAACTAGTAGACATACATAACCATTATTCTTGTCCATGTGCGGGAATTGCCTTATGCCTTTCACTAGAAAGCCCTATGATCTTCAGCCATAAGTGCTTAGAATCAATTACTGTTGATTGGAGCCTTAAAGATCCTCCAAAGTTCCACCCTTTACAACCTGGGACAGGCTTTAGGACATATTTCAAGGGCCGCCATTTGTTAATTAAAATTTTAAGAAGGGGTGGTGTTTTTATGCCCTATGCTTGGGGTGACAAGAAAGTGGAATTGAAAATTACGGGTAAGAATTTGTGCGGGTGTCGGAAGCTGAAACTAAGGGGCTTTGGGAGCCGTGTGATATATGAGGATGATCAATGGTGGCAAAGAGATGAAGAAGCAGATGAAGATGAGATAAATGTATCTTCTGTTTCAGTTCAGTATGGTATTAATCTGAAGCAATCAAGAATAGCTGAAATCATAGATAACTTAGAATGTGATGAGCTAAGAAGGAAGCATGTAAGAATCCTTTATTTCTTATTATGTTTCTTTTCTAGTTTTAAGAAGCTACCTAATCCTTAA 3498 0.3794 MTSKGGSCQISQWKYHVFLSFRGGDTRKSFTDHLYAALNRKGILVFRDGEQLLRGEVISQQLLHAIQQSLTSVVVISPDYASSTWCLEELHNILESTRVLGRKAFPVFYGVDPSHVRYQSGNLAESFRKLEQRFSADLNKVQKWRNALRGVANLSGWDSRDRHETELIEDIVGEVWINLQQKLQSDNDGLVGNVSRIRELDSLLSIESLDVRFIGLWGMGGIGKTTLARVVFDKIRDNFEIPCFLHNVKEVSKTPDGLVCLQRKLLSPLKIRNLEIDDLYDGKKKIRNLLCNKKVLLVLDNISSLSQLESLAKNQEWFGLGSRVIVTTKDRHLLVSHGVCKNYEMEILNESDSFQLFSQKAFKSDKPPEHYLELTKSMLHYAGGLPLALEVLGSFLCERKLSEWEDALAKIKQVPPDEIWKTLRISYDELEDAEKTMFLDIAFFFAGQWEVEVIQILKDCGLHPTIGISLLSEKSLVTCQAGTLGMHDLLQEMGKKVVFQESPNDASRRSRLCSLEEVNQVLRKAKGTESTEGIIVKSSDPHEEHWDPEAFSKMYNLKVLIILCDLHLPLGLKCLSSSLKILEWESCSLRELPLGLPLDELVHLKMHCSKFNQLWSGTKHFRKLKSIDLTDSRDLIRTPDIFEVPCLERLVLKGCKNIVEVHQSVAQHKHLLELNLECCINLKTLPRKLEMDALKELILSGCSQVKKLPEFGKSMVYLSILSLKDCKSLICLPQSIRNLKSLIKLDIQGCSKLFGLPNNLNENNVVEEVEVNETTRREAPLSLSDFKALVTLLSKGCDWLSSKSWSISLPADEVFGCKQYPLSMDLKFSPLLGCSMLKSLNLAYCNLSDGSIPNDIGQLSALEKLILNGNNFAHLPACIQKLHRLKWLELNDCPRLGTLPLLPPAVTCLTLQNCTQLAPISFDSRRIWNILDARRRELKYGLWFMVPGSEIPPWFENEDYVLAEANLLDPDYGEKYDFLASKLVDIHNHYSCPCAGIALCLSLESPMIFSHKCLESITVDWSLKDPPKFHPLQPGTGFRTYFKGRHLLIKILRRGGVFMPYAWGDKKVELKITGKNLCGCRKLKLRGFGSRVIYEDDQWWQRDEEADEDEINVSSVSVQYGINLKQSRIAEIIDNLECDELRRKHVRILYFLLCFFSSFKKLPNP* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0602 1165 Gene3D - 9 182 IPR035897 -
Lan13g0602 1165 Gene3D - 347 431 IPR042197 -
Lan13g0602 1165 Gene3D Ribonuclease Inhibitor 823 935 IPR032675 -
Lan13g0602 1165 ProSiteProfiles TIR domain profile. 13 183 IPR000157 GO:0007165
Lan13g0602 1165 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 718 962 - -
Lan13g0602 1165 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 718 - -
Lan13g0602 1165 Pfam NB-ARC domain 202 428 IPR002182 GO:0043531
Lan13g0602 1165 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Lan13g0602 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 441 IPR027417 -
Lan13g0602 1165 Gene3D - 183 340 IPR027417 -
Lan13g0602 1165 PRINTS Disease resistance protein signature 213 228 - -
Lan13g0602 1165 PRINTS Disease resistance protein signature 289 303 - -
Lan13g0602 1165 PRINTS Disease resistance protein signature 382 396 - -
Lan13g0602 1165 PRINTS Disease resistance protein signature 737 753 - -
Lan13g0602 1165 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 718 IPR044974 GO:0006952
Lan13g0602 1165 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 718 962 IPR044974 GO:0006952
Lan13g0602 1165 Pfam TIR domain 14 190 IPR000157 GO:0007165
Lan13g0602 1165 SMART till_3 14 154 IPR000157 GO:0007165
Lan13g0602 1165 Gene3D Ribonuclease Inhibitor 691 779 IPR032675 -
Lan13g0602 1165 Gene3D Ribonuclease Inhibitor 544 690 IPR032675 -
Lan13g0602 1165 SUPERFAMILY L domain-like 551 927 - -
Lan13g0602 1165 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0602 Lan-Chr13 4890386 4895409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0602 11 793 WRKY Transcription Factor Family AT4G12020 29.262 7.41e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0602 - - lang:109363418 2310.41