Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0589 ATGAGGAGTACTACCAGTACCGGAGTTGGAGAAATCGTAGAAGTACAAGGCGGTCACATTGTACGGTCCACAGGGCGAAAGGATCGACACAGCAAAGTATGCACCGCAAAGGGACCAAGAGACCGACGAGTCCGCCTCTCGGCCCACACAGCCATTCAATTCTACGACGTCCAGGACCGCCTCGGCTACGACCGCCCCAGCAAGGCGGTCGATTGGCTCATAAAAAAAGCCAAAGCCGCCATCGACCAGCTAGCCGAGCTCCCAGCCTGGAACCCGACCGCCATAATGGAACAGCAACAACAGCAACAGCAGCAACAACAAATAAACGAAATCTTCCACCGCGATACACCCGCGGCGGAGGATGGACTAATTACTGGCTCTAGTTGCCGTAATGTTAGTGGAAGAATGTCAGAAGAGTTTCAACAACAGCAATTTGTTGATGAGAATAACAACAATGATAACAACAGTAACAAATACAACAGTGCTGGTTCTGGTTTTCTTCCACCATCTATGGATACTGATATCACTGATACAATTAAGTCTTTTTTTCCTATGGTAGCTGCTGCTGAAACGACCACGTCGTTTAACAATTATTCTACACCGCCGGATTTGTTGTCAAGAACAACAAGCACTGCTGCTAATCACAACCACCAGCAAGATCTACGGCTCTCGTTACACTCGTTTCAAGACCCTATTCTACTCCACCACCACCAACAACAACAACAGAATCAGAATCAGACTCAGAACCAGAATCAGCAAGTGTTGTTCAATGGAATTAACACGCTTGGGTTTGATGGTGGTGGTTCTTCAGGGTGGTTAGAACAACACCACCAACATGAACAGGAACATGGTCGGTTTCATAGAATGGTGGCTTGGAACGCTGCTGCTGCAGATGATAGTCACAGTGGCGGTGGATTTGTGTTTAACTCGCCGCCGCCGTCCACGGTGGCGCCAGCGGCGATGTTTGGCCATCATGGTCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACTCCTTCGATTCGTGCTTGGATAGACTCGAATTCCTTGGCTACGGCGGCAACTGTCGCCGCCGTCTCTCACCCTCATTATCACCATCACTATCTTTCGCCGTCGATCCACCAGGCTTCTGCCACCGGATTTGCTTCACCTTACGGTGGCTTCTCCGGCTTCCGCATACCAGCACGAATTCAGGGTGAAGAGGAGCACGACGGCGTTTCAGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGTCATTAA 1266 0.5008 MRSTTSTGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPAWNPTAIMEQQQQQQQQQQINEIFHRDTPAAEDGLITGSSCRNVSGRMSEEFQQQQFVDENNNNDNNSNKYNSAGSGFLPPSMDTDITDTIKSFFPMVAAAETTTSFNNYSTPPDLLSRTTSTAANHNHQQDLRLSLHSFQDPILLHHHQQQQQNQNQTQNQNQQVLFNGINTLGFDGGGSSGWLEQHHQHEQEHGRFHRMVAWNAAAADDSHSGGGFVFNSPPPSTVAPAAMFGHHGQYFSQRGPLQSSNTPSIRAWIDSNSLATAATVAAVSHPHYHHHYLSPSIHQASATGFASPYGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0589 421 ProSiteProfiles TCP domain profile. 26 84 IPR017887 -
Lan13g0589 421 MobiDBLite consensus disorder prediction 399 421 - -
Lan13g0589 421 Pfam TCP family transcription factor 25 155 IPR017887 -
Lan13g0589 421 PANTHER TRANSCRIPTION FACTOR TCP4 4 421 - -
Lan13g0589 421 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 421 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0589 Lan-Chr13 4720679 4722427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0589 8 421 TCP Transcription Factor Family AT3G15030 46.712 2.04e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan13g0589 TCP 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0589 - - aip:107630075 448.743