Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0583 ATGGATAGTTACTGCCACCATTACTCTGATAACAATGATTCACTTCTCCCACCTGGTTTTCGTTTCCACCCCACTGACGAGGAGCTTATCACATACTACCTTCTCAAGAAAGTTCTTGATAACACCTTCACTGCTAGAGCCATCACTGAAGTTGACCTCAACAAGTGTGAGCCATGGCAACTCCCAAAGAAAGCGAAGATGGGTGAGAAGGAGTGGTACTTCTTTAGCCTACGTGACCGGAAGTACCCAACAGGGTTACGTACTAATAGGGCAACAGAAGCTGGTTATTGGAAAGCTACTGGAAAAGATAGAGAGATTTATAGTTCCAAGACTTGTGCACTTGTTGGTATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCTCCGAAAGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCGTACCATTATCTCTCTAGGAGCTCCAAGGATGAATGGGTTATATCCCGTGTGTTCCAGAAAAGCACCACAGGTGTTGGCTCCACCGTGTCTGCCACCGCCACTAGTTGTTCCAAGAAGACAATAGTTAGCACCTCATCTGCCAGCATGAGCCTATGTCCTGAACCTGATTCACCTTCCTCCATTTACCTTCCACCACTGCTGGACTCTTCTCCTTACCCCATCAGCAGCGCCACCCCATTCAACGACCGTGATAGCTGCTCCGACGTAAGCACCACCGTCGCCCAAAGAGAGCACGTGTCCTGTTTCTCCACAATCTTTGCCAACAACTTCAACAATGCTACCTTCGACCTTGTTCCACCGCCGCCGCAGAATCCTCTTAATCTTGATCCTTTCACTCGGTTCCAACGCAATGTTGGTGTTTCTGCCTTCCCTAGCTTGAGGTCTCTCCAAGATAATCTTCAGCTACCTTTCTTTTTCTCCTCCACCCCAGTCCACGGCAGTGGTTCGAATGACATGGCTACTGCCGGGCACTGGCCGGTGGCGGAGGATGGGAAAGTCGTGGTGGCTGATGGTGGTTCCAGCATGGGGCTGGGGCATTCCGAGCTTGATTGCATGTGGGGTTATTGA 1071 0.4921 MDSYCHHYSDNNDSLLPPGFRFHPTDEELITYYLLKKVLDNTFTARAITEVDLNKCEPWQLPKKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSTTGVGSTVSATATSCSKKTIVSTSSASMSLCPEPDSPSSIYLPPLLDSSPYPISSATPFNDRDSCSDVSTTVAQREHVSCFSTIFANNFNNATFDLVPPPPQNPLNLDPFTRFQRNVGVSAFPSLRSLQDNLQLPFFFSSTPVHGSGSNDMATAGHWPVAEDGKVVVADGGSSMGLGHSELDCMWGY* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0583 356 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Lan13g0583 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 353 - -
Lan13g0583 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 10 353 - -
Lan13g0583 356 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan13g0583 356 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Lan13g0583 356 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0583 Lan-Chr13 4646408 4648739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0583 1 356 NAC Transcription Factor Family AT5G53950 52.208 7.40e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan13g0583 NAM 5.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0583 - - cam:101501114 454.521