Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0575 ATGAACAACAACATCAACAGGGTCCACAGAATCCTTTTACCACCATCAACAACACCACCACCACCTTCTCCTCCTATATTTTCCTTCATTGCTGCTCTCATAATTTCAATGCTAATCTTCATGTGCATCTATGTTTTCTCTGTCATTGTTTCTGTGGCTATTCTCATCACCCTTTTCATCACCAGCATGTACCTTCTCAGGTTTACCAATGATAGGCATGAAATATTGGGTACTGAAATGAGAGAAAGGAACATCTTTTATGGTCAAACCGCACAAAATAACCAAAGGGTGGTGAGGTTTTTTGATAAACTTTTCTGGGTTGTTGAGGAAAAAGGTGGTGGCAAAAACATGAGAGAAGGGTCAAATAAGAAACTTATAGGATCTGTTGCATGTTTTGGAAGCCAAGAAATAATGACTTCAACACCAAGTTGCAGTGACTGTGCAATTTGCTTGGAGGATTTCAAGGAAGGAGAAGAGTGCTTAGTTTTTCCAATTTGTGAACATCTTTTTCATTTGATTTGTATCCATCAGTGGTTAGAGAACAAACCCACTTGCCCAATTTGTCGCCATTGTATCCCAGCAAACATGGTCACAAAAACTAGAAGCATAGAATTATTGGATAATTTAGTTTAA 633 0.3823 MNNNINRVHRILLPPSTTPPPPSPPIFSFIAALIISMLIFMCIYVFSVIVSVAILITLFITSMYLLRFTNDRHEILGTEMRERNIFYGQTAQNNQRVVRFFDKLFWVVEEKGGGKNMREGSNKKLIGSVACFGSQEIMTSTPSCSDCAICLEDFKEGEECLVFPICEHLFHLICIHQWLENKPTCPICRHCIPANMVTKTRSIELLDNLV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0575 210 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 4 197 - -
Lan13g0575 210 Pfam Ring finger domain 146 189 IPR001841 -
Lan13g0575 210 SMART ring_2 147 188 IPR001841 -
Lan13g0575 210 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 4 197 - -
Lan13g0575 210 SUPERFAMILY RING/U-box 146 195 - -
Lan13g0575 210 ProSiteProfiles Zinc finger RING-type profile. 147 189 IPR001841 -
Lan13g0575 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 195 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0575 Lan-Chr13 4515345 4515977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0575 27 195 C3H Transcription Factor Family AT1G53010 26.705 3.01e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0575 - - lang:109363523 409.838