Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0568 ATGGTGAAAATGGCATTTATAAAATGGGTTCCTTATGTTTTGGTTGTTTTTCTAGTTTTGGTGAATGGTTCATATGCCTTATACACTCCACCTGATAGTTATCTAATTGCTTGTGGTTCTTCTCGAAATATTACCTTCCAAGGTCACACTTTTGTTCCTGATTCACAGCATTCATCACTTGTATTAAAAACTGGGAATTCTTTTGTTGCTAGTTCTAATTCTAGTAGTGCCCCTTTTCCAATCTACCAATCAGCTAGGATTTTCACTGATAAAGCTTCTTATAGGTTTGAAATTCAGCAAGAGGGTAGGCACTGGGTCAGGCTATATTTTTCCCCTCTTCCAAACTCTGGTCATAATTTGACTTCTGCTTCTATGACTGTGGTTACTGATAATTTTGTCCTCTTGAATAATGTTACCTTTAGGAACTATAATGGTTCTTATATGTTCAAGGAGTATGCAGTTAATGTTACCTCTGATACTTTGACTGTTACCTTCATTCCTTCAAATGGTTCGGTGGCCTTTGTAAATGGAATCGAAGTTGTGTCAATGCCAGATGAGTTGTTTGTTGATCAGGCTTTGGCTCTTAACCCACCAGCTCCATTTAGTGGACTTTCCGAGCTTGCTTTTGAAACTGTTTATCGCTTAAATATGGGGGGTCCTTTGATTACTGCCCAAAATGACACCCTGGGAAGGACTTGGGTGAATGATCTGAACTACCTTCATGTGAACAATTCTGTCTTTAATGTCTCAGTCAGTCCTTCAACGATTAAGTATCGAGCAGGTGTTACTCCTGAGACAGCGCCAAATTTGGTCTATGCCACTGCTGAAACAATGGGGGATCCAAATGTAGGCAACCCAATTTTCAACATCACTTGGGTCTTCACTGTGGATCCAAATTTCTCCTATTTTGTTCGGGTTCACTTTTGCGATATTATAAGCAAGTCTCTTAACACTTTGGTGTTCAATTTATTCATAAATTCAGACATAGCTCTTGGAAGTCTTGACCTCTCATCCTCAACTAATGATTTAGCCATGCCTTATTACAAGGACTTCGTTTCCAATGCCTCAGCAGACTCTAAAACTTTGACTGTAAGTGTTGGTCCAGATAAAATGGCAGACATAACAAATGCCACTATGAATGGGCTAGAGATAATGAAGATCAGCAATGCATTGAAGAGCTTGGATGGTTTTTCTTCAGTTGACAATCTACTTCCTAGATCACCTTCAGAGAAGAACAAAATAGGAATAATAGTTGGTTCTGCACTTGGTGCTCTAGCTGCTATAGCATTGGTTGGTTTCTGTTGCTGCTGCTTGGTAAGGCACAAGTCAAAGTCTCCTCAACAGGGAAATTCACGGCTTCCTTTATCCCTATTTGGAAACTCTCTGACATTGACAAAAATGTCAACAACTTCACAGAAGAGTGGAACTCCAAGCTGCATTTCTTTAACTTCAACAAATCTTGGCCGTTTCTTCAGTTTCCAAGAAATCCTAGATGGAACCAACAAGTTTGATGAAAAGCTGCTTCTTGGTGTTGGTGGTTTCGGTAGGGTTTATAAAGGAACACTTGAAGATGGGACTGATGTAGCTGTTAAAAGAGGCAATCCAAGATCTGAACAAGGACTTGCTGAATTCCGAACAGAAATTGAAATGCTGTCCAAGCTTCGCCACCGTCATCTCGTGTCTCTAATTGGTTATTGTGATGAGAGATCAGAAATGATTCTTGTCTATGAATACATGGCCAACGGACCCCTAAGGAGTCATTTGTACGGAACCGACCTGCCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCAGCAAGAGGCCTCCATTATCTTCATACTGGTGCAGCTCAAAGCATAATTCACCGAGATGTAAAGACAACAAATATTCTCTTAGATGAGAACTTTGTTGCTAAGGTTGCTGATTTTGGCCTATCCAAAACTGGTCCTGCCCTTGATCAGACTCACGTGAGCACTGCCGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTTAGAAGACAACAGCTTACCGAGAAATCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTATTATGCACAAGACCGGCCTTGAACCCTGTCCTTCCAAGAGAGCAGGTTAATATAGCTGAATGGGCAATGAGCTGGCAGAAAAAAGGGATGCTTGATCAAATCATGGATCAAAATCTGGTGGGGAAGGTAAATCTTGCTTCTCTTAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCTGAGTACGGTGTGGACAGGCCATCTATGGGAGATGTCTTATGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCCCTCACAGAACCTGAAGATAACAGCACAAACCACATTACTGGTATTCAGTTGACTCCAGTCGATCATTTTGATAACAGTGTGAGTATGATTGAAAGGAGAAACTCTTGCACCGATGATGATCCAGAAGATGCTGCCACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGTGGAAGATGA 2535 0.4107 MVKMAFIKWVPYVLVVFLVLVNGSYALYTPPDSYLIACGSSRNITFQGHTFVPDSQHSSLVLKTGNSFVASSNSSSAPFPIYQSARIFTDKASYRFEIQQEGRHWVRLYFSPLPNSGHNLTSASMTVVTDNFVLLNNVTFRNYNGSYMFKEYAVNVTSDTLTVTFIPSNGSVAFVNGIEVVSMPDELFVDQALALNPPAPFSGLSELAFETVYRLNMGGPLITAQNDTLGRTWVNDLNYLHVNNSVFNVSVSPSTIKYRAGVTPETAPNLVYATAETMGDPNVGNPIFNITWVFTVDPNFSYFVRVHFCDIISKSLNTLVFNLFINSDIALGSLDLSSSTNDLAMPYYKDFVSNASADSKTLTVSVGPDKMADITNATMNGLEIMKISNALKSLDGFSSVDNLLPRSPSEKNKIGIIVGSALGALAAIALVGFCCCCLVRHKSKSPQQGNSRLPLSLFGNSLTLTKMSTTSQKSGTPSCISLTSTNLGRFFSFQEILDGTNKFDEKLLLGVGGFGRVYKGTLEDGTDVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNLASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALTEPEDNSTNHITGIQLTPVDHFDNSVSMIERRNSCTDDDPEDAATSAVFSQLVNPRGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0568 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lan13g0568 844 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0568 844 SUPERFAMILY Protein kinase-like (PK-like) 479 774 IPR011009 -
Lan13g0568 844 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Lan13g0568 844 PANTHER OS07G0166700 PROTEIN 20 837 IPR045272 GO:0004714|GO:0006468
Lan13g0568 844 CDD STKc_IRAK 509 774 - -
Lan13g0568 844 ProSiteProfiles Protein kinase domain profile. 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0568 844 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Lan13g0568 844 Gene3D - 207 389 - -
Lan13g0568 844 Gene3D - 33 184 - -
Lan13g0568 844 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 837 - -
Lan13g0568 844 Pfam Protein tyrosine and serine/threonine kinase 508 769 IPR001245 GO:0004672|GO:0006468
Lan13g0568 844 Pfam Malectin-like domain 36 387 IPR024788 -
Lan13g0568 844 Gene3D Transferase(Phosphotransferase) domain 1 579 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0568 Lan-Chr13 4437738 4441327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0568 4 844 Receptor kinase-like Gene Family AT3G46290 52.453 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan13g0568 Malectin_like 5.1e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0568 - - gmx:100809700 1430.62