Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0554 ATGATGGACTATATAAGAAGGCTTAAGGTTTGCATTAGATGGTTCCAAGATCTTGAGATGAACTACTCACTAGAGCAGGAAAGGTTAAAGAATTCATTGGAATTAACCCAACAGAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAACTAAATTCAATTATAACAGAAATGAGAAGGAATTGCGCTTCTTTGCAAGAGAAATTGATTAAGGAAGAATCGGAAAGGGTGGTTGCAGTAGAATCTCTTGAAAAAGAGAGGGAGGCTAGGCTTAACATTGAGAGGTCACAGACTACTCTGTCTGAGGACCTTAGCAAAGCTCAAAGAGAGATTCAAAATGCAAATCAGAAGATATCATCACTCAATGACATGTATAAAAGGTTACAGGATTACATAACAAGCTTACAACAGTACAATGGAAAGCTACATACAGAGCTTTCATCAGTTGAAGATGAACTTAAACGCGTAGAGAAAGAGAAGTTTGCTGCTCTGGAGAACATCACCATGTTAAGGAGTCAACTTACCTTGTCCATTTCTTCTCAAGATGAGGCCATAAAACAAAAGGACACTCTGGTTAGTGAAGTTGCTTCTCTCAGAGGAGAATTGCAACAAGTAAGGGATGAACGGGACCGCCAACTATCTCAAGCGCAAACTTTAACTTTTGAATTAGAGAAATTAAAAGAATCCAGGGAAAGTTCGTGCACTGAACTGGACAACTTGACACTAAAAGCAAATGAACTGGAGGCGAATTGCTCTTTAAAAGATAATCAGATAAGAGAATTGCAAGAGCAACTAGCAATTGCAGAGAAGAAACTTCAGGTGCTTGATATATCTGCATTCGAGACAAGGACGGAATTTGAAGGACAACAGAAATTTGTAAATGAGTTACAAAGACGCGTTGCAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAACTAAAAGGGAACATCCGCGTATTCTGTCGAGTGAGGCCTTTGTTGCCCGATGAAAGTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCAACATCCATGGAAGCTTCTGGACGAGACATTGATCTAACCCAAAGTGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTACACCGGAGGCAACACAAGAAGACGTTTTTGTAGAAATTTCACAGCTAGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGCCAGACTGGCTCCGGAAAAACCTATACAATGATGGGAAGGCCAGGGCATCCTGAGGAAAAGGGCTTGATACCTCGTTCGCTAGAACAAATATTTCAAGCAAAGCAGTCTCAACAACCTCAAGGTTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTATCGTCAAACAGATTATCATCAGAAGCAACTCGCTTAGAAAATGGTACTCCTGGAAAACAATACACAATCAAACATGATGCAAGTGGAAATACACATGTTTCGGATCTTACTGTAGTGGATGTTAACAGTATTAAAGAGGTCGGATTTCTGTTAAATCAAGCTGCAAATAGCAGATCAGTGGGAAAGACTCAGATGAATGAACAATCGTCAAGAAGCCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGCATTTTGAATCTTATTGATCTTGCTGGTAGCGAGCGTCTTTCGAAGAGTGGATCAACCGGGGACAGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTGTCATCACTGAGTGATGTTATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAACTAACATATCTACTTCAGCCTTGTCTAGGTGGTGACTCGAAGACGTTAATGTTCGTAAACATCTCGCCCGATCCTACTTCAGTTGGCGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTAAATGCTTGTGAGATTGGAACACCACGTCGTCAAACACATGCACGTTCAACAGACTCTCGCTTGAGCTATTTCTAA 2076 0.3974 MMDYIRRLKVCIRWFQDLEMNYSLEQERLKNSLELTQQKCIEIELLLKIKEEELNSIITEMRRNCASLQEKLIKEESERVVAVESLEKEREARLNIERSQTTLSEDLSKAQREIQNANQKISSLNDMYKRLQDYITSLQQYNGKLHTELSSVEDELKRVEKEKFAALENITMLRSQLTLSISSQDEAIKQKDTLVSEVASLRGELQQVRDERDRQLSQAQTLTFELEKLKESRESSCTELDNLTLKANELEANCSLKDNQIRELQEQLAIAEKKLQVLDISAFETRTEFEGQQKFVNELQRRVADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMEASGRDIDLTQSGQKHSFTFDKVFTPEATQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSSNRLSSEATRLENGTPGKQYTIKHDASGNTHVSDLTVVDVNSIKEVGFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPTSVGESLCSLRFASRVNACEIGTPRRQTHARSTDSRLSYF* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0554 691 Coils Coil 100 134 - -
Lan13g0554 691 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 690 - -
Lan13g0554 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 668 IPR027417 -
Lan13g0554 691 CDD KISc_C_terminal 328 672 - -
Lan13g0554 691 Coils Coil 142 169 - -
Lan13g0554 691 Pfam Kinesin motor domain 336 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 PRINTS Kinesin heavy chain signature 406 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 PRINTS Kinesin heavy chain signature 540 557 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 PRINTS Kinesin heavy chain signature 571 589 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 PRINTS Kinesin heavy chain signature 620 641 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 Coils Coil 51 78 - -
Lan13g0554 691 ProSiteProfiles Kinesin motor domain profile. 330 670 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 SMART kinesin_4 328 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0554 691 Coils Coil 191 218 - -
Lan13g0554 691 Coils Coil 226 281 - -
Lan13g0554 691 PANTHER KINESIN-LIKE PROTEIN 5 690 - -
Lan13g0554 691 Coils Coil 296 316 - -
Lan13g0554 691 Gene3D Kinesin motor domain 276 672 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0554 Lan-Chr13 4272054 4277082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0554 302 667 Calmodulin-binding Proteins AT5G65930 40.761 4.38e-81 278