Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0548 ATGGCTAACTTCATTATTTTAAGGTCTAATAAAGCAGTTCTTGGCTTGGGTTGGCTATGTGTGATGATGTTGGTGCATCAAGGTGCTGCTGGCTATGAATTCATAGTTGGGGGTCAAAAGGGATGGAGTGTTCCAAGTGATACTAATTTCAATCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTCAAATAGGAGACTCCATTGTATTCAACTACCAATCTGGCCAAGACTCAGTGCTGTATGTAAAGAGTGAAGACTATGCCACTTGCAACACTGGCTCACCTTATGCAAAATTCTCTGATGGACACACAGTCATCAAACTCATTCATTCAGGGCCTCACTTCTTCATAAGTGGAAACAAAAACAACTGTCTAAAAAATGAAAAGGTAACAGTGATAGTGTTGGCTAACAGAAACAACCAAAACTCATCAAACACCAACCAAACAAACACTGCTTCTCCACCTTCACCACAATCATCATCAGCTCCTCCACCTGCAGGAATTGTAGAATCAAATCCAACACCTGCTCCTGTCAGTGTCAGCTATCATCATCATAATGCTGCTACTTCAATATTGATCAATTCTGCTGCTTCTATTGGAACATTCATGGCTTCTCTTCTTCTAATCTTATCTCTCTAA 639 0.4038 MANFIILRSNKAVLGLGWLCVMMLVHQGAAGYEFIVGGQKGWSVPSDTNFNPFNQWAEKSRFQIGDSIVFNYQSGQDSVLYVKSEDYATCNTGSPYAKFSDGHTVIKLIHSGPHFFISGNKNNCLKNEKVTVIVLANRNNQNSSNTNQTNTASPPSPQSSSAPPPAGIVESNPTPAPVSVSYHHHNAATSILINSAASIGTFMASLLLILSL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0548 212 PANTHER BLUE COPPER PROTEIN 10 212 IPR039391 GO:0009055
Lan13g0548 212 CDD OsENODL1_like 32 135 IPR041846 -
Lan13g0548 212 MobiDBLite consensus disorder prediction 139 156 - -
Lan13g0548 212 Gene3D - 32 148 IPR008972 -
Lan13g0548 212 ProSiteProfiles Phytocyanin domain profile. 32 136 IPR003245 GO:0009055
Lan13g0548 212 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 10 212 - -
Lan13g0548 212 SUPERFAMILY Cupredoxins 31 135 IPR008972 -
Lan13g0548 212 MobiDBLite consensus disorder prediction 139 177 - -
Lan13g0548 212 Pfam Plastocyanin-like domain 42 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0548 Lan-Chr13 4242438 4243960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0548 13 191 Phytocyanin Superfamily AT3G20570 48.603 1.05e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0548 - - gmx:100792916 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1441 8 21539332 21540149 Lan13g0548 13 4242438 4243960 LSH