Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0541 ATGCGTCCACCACTGAAGAAAATCGATTTCTTTCGAGGAGACACTGTTGAAGTGTGCAGCAATGAGCCTGGTTTTCTTGGCTCATACTATGAGGCCAACATCGTGTCACGCCTTGACAATGGTCTCTACGTGGTTTGTTACAAGAACCTTCTAGAAGATGATGAGTCAAAGCCATTGTCAGAGACCATTTACCCAAAAGAGCTTCGTCCATTTCCACCAAAGATTCATGCTACCCAGTTCTTCCTTTACCAAAAGGTCGATGCTTTCGACAACGATGGTTGGTGGGTCGGTGAAATCACGGGCAAAAATGGTTCTTACTATTTCGTTTATTTCGCTTCAACGCATGAGGAGATAGCGTATCATTGTTCTAAGATAAGGGTGCATCAAGAATGGGTTAATGGGGAATGGGTTTGA 414 0.4396 MRPPLKKIDFFRGDTVEVCSNEPGFLGSYYEANIVSRLDNGLYVVCYKNLLEDDESKPLSETIYPKELRPFPPKIHATQFFLYQKVDAFDNDGWWVGEITGKNGSYYFVYFASTHEEIAYHCSKIRVHQEWVNGEWV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0541 137 SMART agenet_At_2 8 76 IPR014002 -
Lan13g0541 137 SMART agenet_At_2 78 133 IPR014002 -
Lan13g0541 137 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 136 - -
Lan13g0541 137 PANTHER - 8 136 - -
Lan13g0541 137 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0541 Lan-Chr13 4117594 4118007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0541 20 131 PHD Transcription Factor Family AT5G58610 29.851 1.56e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0541 - - gmx:106794115 207.994