Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0539 ATGGCTTCTCGACAGAACTACGTTTACATCGCCAAGCTCGCTGAGCAAGCTGAGCGATACGATGAGATGGTGGAAGCAATGAAGAATGTGGCAAATCTGGATGTGGAACTGACAGTTGAAGAGAGAAATTTGCTTTCTGTTGCTTATAAGAACGTGATCGGTGCTCGTAGAGCATCATGGAGGATCCTGTCTTCCATAGAGCAAAAGGAAGAGTCAAAAGGAAATGAAGTACATGTCAAACGGATTAATGAGTATAGGCAAAAGGTTGAAACGGAGCTTTCAAGCATCTGTAATGATGTTATGAGAGTGATTGATGAACATCTTATACCTTCTGCTGCACCTGGTGACTCAACTGTCTTTTATTATAAGATGAAAGGAGATTATTATCGTTATCTTGCAGAATTTAAGGCAGGCACTGAGAAGAAGGAGGCTGCTGACCAATCGCTGAAAGCATATGAGTCTGCTACCACAGCAGCAGGAGCTGATTTACCTCCCACACATCCCATCCGATTGGGTCTGGCTTTAAATTACTCTGTTTTCTATTATGAGATTATGAATTCTCCAGAGAGAGCTTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCCGAGCTTGACACCTTAAGTGAGGAGTCATACAAAGATAGCACCTTGATCATGCAGCTTCTCAGGGACAACCTTACCTTGTGGACTTCTGACATCCCAGAGGAGGGAGACTTCCATAAAGTAAATGGCTCTACAAAGGTTGTTGGAGATGACGATGCAGAGTGA 774 0.4302 MASRQNYVYIAKLAEQAERYDEMVEAMKNVANLDVELTVEERNLLSVAYKNVIGARRASWRILSSIEQKEESKGNEVHVKRINEYRQKVETELSSICNDVMRVIDEHLIPSAAPGDSTVFYYKMKGDYYRYLAEFKAGTEKKEAADQSLKAYESATTAAGADLPPTHPIRLGLALNYSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGDFHKVNGSTKVVGDDDAE* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0539 257 ProSitePatterns 14-3-3 proteins signature 1. 42 52 IPR023409 -
Lan13g0539 257 Gene3D - 1 245 IPR036815 -
Lan13g0539 257 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Lan13g0539 257 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Lan13g0539 257 SUPERFAMILY 14-3-3 protein 1 234 IPR036815 -
Lan13g0539 257 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 2 240 - -
Lan13g0539 257 SMART 1433_4 4 245 IPR023410 -
Lan13g0539 257 Coils Coil 10 30 - -
Lan13g0539 257 PIRSF 14-3-3 1 243 IPR000308 -
Lan13g0539 257 Pfam 14-3-3 protein 11 232 IPR023410 -
Lan13g0539 257 PANTHER 14-3-3 PROTEIN 2 240 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0539 Lan-Chr13 4097135 4115482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0539 4 257 14-3-3 family AT2G42590 80.156 3.32e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0539 K06630 - gmx:547990 444.506