Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0533 ATGGCACAATTGCCACCAAAGATTCCAAACATGCCACCTAGTTGGCCTGAATTCTCTTCTCACCAAAAGGTACCTTCTCTCACAAGCATGCAACCAAATGCTGCAAACAATAACCATCAAGATCATCCTCAACAACAAAACAACCCTTCATGGGTTGATGAGTTCTTGGACTTCTCTTCAGCTAGGCGTGGGGCCCACCGGCGGTCGGTGAGTGACTCCATCACCTTCATGGAGCCACCAAAGGGTGATGATGATCACAATGAGTTTGAGAGGTTTGATGATGCACAATTCTTGTCCATGTTCAATGATGAGGTTTCAGGGAATCATATTTTGATGCCACCAACAATATTGTGTACCTCAAACCCTTCTAGCCCTTCTGATCATAACAGCATCAATGATGATCATAAAGAAAAAACAAAACAGCATGAGAAGGAGAAGAAGGAGCAGCATCAGAAGAAGCAATTGAAGAATGAATTGGAGGATGAGGATGAAAGCCAATGCAAACAGGAAATCACAGAAGGTTTCAATGATGATAATAATAATGATAATGCAAATGCAACAACTTGCTCCAATGACAGAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCTAGAGTGAGGAAGCTGCAGTATATATCAGAACTTGAACGAAGTGTAACTTCATTACAGACCGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTGGATCATCAAAGATTGCTTCTAAATATAGACAACAGTGCTCTCAAGCAAAGAATTGCAGCCTTGGCCCAAGACAAGATCTTCAAAGATGCACATCAAGAGGCACTGAAAAGGGAGATAGACAGACTCAGGCAAGTGTACCACCAACAAAACATGAAGCAGATGGACAACACTGCAGGGTCACAATCTCAATCACCAAAACCAATATGTGATACTCAGACTGAAAAGGAACACCTTATCAATGTTTGA 981 0.4169 MAQLPPKIPNMPPSWPEFSSHQKVPSLTSMQPNAANNNHQDHPQQQNNPSWVDEFLDFSSARRGAHRRSVSDSITFMEPPKGDDDHNEFERFDDAQFLSMFNDEVSGNHILMPPTILCTSNPSSPSDHNSINDDHKEKTKQHEKEKKEQHQKKQLKNELEDEDESQCKQEITEGFNDDNNNDNANATTCSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNIDNSALKQRIAALAQDKIFKDAHQEALKREIDRLRQVYHQQNMKQMDNTAGSQSQSPKPICDTQTEKEHLINV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0533 326 Gene3D - 197 269 - -
Lan13g0533 326 PANTHER BASIC LEUCINE ZIPPER 34 1 322 - -
Lan13g0533 326 MobiDBLite consensus disorder prediction 172 193 - -
Lan13g0533 326 CDD bZIP_plant_RF2 199 249 IPR044759 GO:0003700|GO:0006355
Lan13g0533 326 SUPERFAMILY Leucine zipper domain 198 252 IPR046347 GO:0003700|GO:0006355
Lan13g0533 326 Coils Coil 132 165 - -
Lan13g0533 326 MobiDBLite consensus disorder prediction 129 171 - -
Lan13g0533 326 Pfam bZIP transcription factor 198 242 IPR004827 GO:0003700|GO:0006355
Lan13g0533 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 248 IPR004827 GO:0003700|GO:0006355
Lan13g0533 326 MobiDBLite consensus disorder prediction 15 54 - -
Lan13g0533 326 MobiDBLite consensus disorder prediction 1 88 - -
Lan13g0533 326 SMART brlzneu 194 258 IPR004827 GO:0003700|GO:0006355
Lan13g0533 326 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 322 - -
Lan13g0533 326 Coils Coil 277 297 - -
Lan13g0533 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Lan13g0533 326 MobiDBLite consensus disorder prediction 116 193 - -
Lan13g0533 326 MobiDBLite consensus disorder prediction 297 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0533 Lan-Chr13 4046749 4050911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0533 1 275 bZIP Transcription Factor Family AT3G58120 58.784 1.80e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan13g0533 bZIP_2 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0533 - - lang:109363232 598.971