Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0526 ATGGGTGTTTCAGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGTCAGATTCTTCAGAGAAGGATAGAAATAAGGTCAGCAAGTTTCGGCATCGGAGAAAGAACTCCATCGAAATTGACAATTGTAAACTTCAAAATGAGTTTGGTGATGGTAGTATGCCACCAATTGGCGACAGGGATGCCCATGCAAACTTTGATACCCATGAAAATCTTGATGCCCATTATTCACCTTCTACTTCACAACAAGAATGGGCTGCTGCAAATAATCAGCAGATCACCAGAGAGGAATGGGCTGCAACATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCTCTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGGGGCCATGCGGTGCGAAAACAAGCAGCCATAACTCTCCGCTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTTTTAGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTGAAACTTCACAACAGAAACTTCACCAACAGCTTGTTAATAAAGCTCATGTTCGAGAAACAGAAGTAAGCAATATTATTCCCCGAGAGGATGGTTGGTGTGACAGTGTGGGATCGGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCGGCCAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCAGGCTATTGCCTCTGGATTTGAACCAGATAAAAGTTGTTGGGGTTGGAATTGGTTGGAAAGGTGGATGGCAGAACGTCCTTGGGAGAATCGCTTTCTTGACATTGATACGAGCGATAGAGTAACCAGAGATGAAAATGGAGGTACGGATGGAAAAAATGGAATCAGACTTCAGTTTAGATTTGCTAACACAAAACCAATTCCATCAAACAATCATGCAAACCATGCTAATCAAAGAGCCAGTCCCTCTCTTTCCGATGGCTGTGATTCTTTACCTAGTATATCAGCAGGTTTTTTGGAGCCATCAAGCATACAGTCTGTTAAACCAAAGTATAATGCAAATGTTCAAAATTCTGTTGAAGTGGCCAACTCAAGACCTGAAATCCGGTCAAGGTCTCATAGTAATCCAAAGGAGAGAACTGTGCAGTTAGATAAACAGGCGAAAAAGCGACTATCTCTGCCTAACAATGGGGGAGGTCCCACTAGAACTAATGTGAAAGGGGCAACTGGCACACAAAAGCCTATAAGGGATAAACCTAAGCTCAATGGAGGTGAGAATGTGAAGGTTACTAAATCTGTTACCCACTCCACTATTATGTAG 1329 0.4387 MGVSGKWIRALVGLKKSEKSDSSEKDRNKVSKFRHRRKNSIEIDNCKLQNEFGDGSMPPIGDRDAHANFDTHENLDAHYSPSTSQQEWAAANNQQITREEWAATCIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARFRARRVRLALESETSQQKLHQQLVNKAHVRETEVSNIIPREDGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAIASGFEPDKSCWGWNWLERWMAERPWENRFLDIDTSDRVTRDENGGTDGKNGIRLQFRFANTKPIPSNNHANHANQRASPSLSDGCDSLPSISAGFLEPSSIQSVKPKYNANVQNSVEVANSRPEIRSRSHSNPKERTVQLDKQAKKRLSLPNNGGGPTRTNVKGATGTQKPIRDKPKLNGGENVKVTKSVTHSTIM* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0526 442 MobiDBLite consensus disorder prediction 399 413 - -
Lan13g0526 442 MobiDBLite consensus disorder prediction 308 331 - -
Lan13g0526 442 MobiDBLite consensus disorder prediction 369 389 - -
Lan13g0526 442 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Lan13g0526 442 MobiDBLite consensus disorder prediction 361 428 - -
Lan13g0526 442 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Lan13g0526 442 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Lan13g0526 442 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
Lan13g0526 442 MobiDBLite consensus disorder prediction 15 34 - -
Lan13g0526 442 MobiDBLite consensus disorder prediction 15 29 - -
Lan13g0526 442 PANTHER IQ-DOMAIN 5-RELATED 2 402 - -
Lan13g0526 442 SMART iq_5 98 120 IPR000048 GO:0005515
Lan13g0526 442 SMART iq_5 121 142 IPR000048 GO:0005515
Lan13g0526 442 Gene3D - 100 141 - -
Lan13g0526 442 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0526 Lan-Chr13 3991995 3997509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0526 1 400 IQD Protein Family AT3G22190 56.188 1.24e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0526 - - lang:109325503 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0373 7 2543364 2544995 Lan13g0526 13 3991995 3997509 LSH
Lan8g1591 8 22908369 22909605 Lan13g0526 13 3991995 3997509 LSH