Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0497 ATGGAACCTCTATGTGAGTTTTGTGTGGTTGTAAGAGCTGTGGTTTATTGCAAATCAGATTCTGCTCGTCTATGCTTGAATTGTGATGTGAGTGTACATGGTGCTAACGCTTTATCCTATAGACACTCACGTTCTGTTCTATGTAACAAGTGCAATTCTCAATCAGCAATTGTCTACTGCATGGATGAAAAAGTGTCTCTATGTCAAGGTTGTGATTGGAACCATAAAGGGTGTTCTCTATTAGGACATCGGCGTCAGGCTTTGGAATGTTATAGTGGTTGTCCCTCTTTAACTGAGTTGCCTAGTTTCTTGTCCTTTGTGATTGATGCCATTTCCTCATGTGGTGGTGGTTTAGATCATGGTTGGGAATCACTTAGTACAACATTGTCTAGTAAAAATGACACTTGCACTAGCAAGTCTTTTGAGCAAGAGCAACCGAATAACGATGATGGCATTGACACTTTTGATTTGGTGAGTGGCAAGTTGAATGAAATTGAAGAATGTGTTAAACCTGAGCCTTGGGTTGAGCAACCTACCACCATTCCACAACAAAATCCAAATCACGCGCCGTACACGATGGATCAGACAATTTTCTGTCCACAGGACTCGAACCTTCCAGAGCTGCAGGAATGTCCGAATCTTAAGGGCTTAGGAATCAGCGATGACGATGATCTCAACATAGATAATTTTAAACTTAATTTTGAAAAGAGAGATGAAATTTTTGATTGCTCTCAAGTTGCCACAAGATATCACCTTGATAAGGGGGAAATAGACTGTTCATTAATGTGGAAAAAGATATCAGAATCTAAATATCTTATTGAGAGTGCCATGGAGTCATCAAGAGATGATAGCCCTGCTAGTATGATGCAGGGAATCAGCAATAATGCGATTTGCGAGCCTATGCCTCCTAACGGCAATGAAAACATCAATTTAGGATTTCATCATGGACAAGTTCATTCAAGCATGCCACTTTCATTGCCCAACATCACTGGTGAAAGTAGTACTACAGATTTTCAAGATTGTGGATTACCACCAGGTTTTATGACAGGTGAACCACCTCCTTGGGAATCAATTTTGGAGGCTTCGACCCCACAAGCCAGGGAGAAAGCTAAATTGAGATACTTTGAGAAAAAGAAAACTCGGAGAGAGGCTGTGTCATATGTGAATAGCATCTATCAAAGAATGAAAAGGAAACTAGTGTTTGGCAAGCAACTACAGCCAACCTCATATTTTCTACCAATTACATTAGTAGAAGATACAATTTTTTGGAACCTCTTCTTTTTATCCATTTTCATTGGAATTATGAGCACAATCATATGTTAA 1323 0.3961 MEPLCEFCVVVRAVVYCKSDSARLCLNCDVSVHGANALSYRHSRSVLCNKCNSQSAIVYCMDEKVSLCQGCDWNHKGCSLLGHRRQALECYSGCPSLTELPSFLSFVIDAISSCGGGLDHGWESLSTTLSSKNDTCTSKSFEQEQPNNDDGIDTFDLVSGKLNEIEECVKPEPWVEQPTTIPQQNPNHAPYTMDQTIFCPQDSNLPELQECPNLKGLGISDDDDLNIDNFKLNFEKRDEIFDCSQVATRYHLDKGEIDCSLMWKKISESKYLIESAMESSRDDSPASMMQGISNNAICEPMPPNGNENINLGFHHGQVHSSMPLSLPNITGESSTTDFQDCGLPPGFMTGEPPPWESILEASTPQAREKAKLRYFEKKKTRREAVSYVNSIYQRMKRKLVFGKQLQPTSYFLPITLVEDTIFWNLFFLSIFIGIMSTIIC* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0497 440 CDD Bbox1_BBX-like 4 47 - -
Lan13g0497 440 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lan13g0497 440 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 382 - -
Lan13g0497 440 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 2 382 - -
Lan13g0497 440 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Lan13g0497 440 SMART bboxneu5 48 88 IPR000315 GO:0008270
Lan13g0497 440 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0497 Lan-Chr13 3674290 3677609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0497 1 403 C2C2-CO-like Transcription Factor Family AT3G21880 33.255 7.84e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan13g0497 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0497 - - lang:109363392 922.154