Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0494 ATGAATAAGAAATGCGAGCTTTGCAAGGGTCCGGCGAGGATCTTCTGCGAGTCAGACCAGGCAACTTTATGCTGGGACTGCGACACTCAGGTCCATGCCGCCAATTTCTTAGTCGCTAGGCACTCCAGAACCCTTCTCTGCCGCGCTTGCCACTCTCCTACGCCGTGGAACGCCTCCGGCGCTAGGCTCGGAAACACCATCTCATTCTGCCACCGTTGCGCCGCCGAAGAAGAAACTGCAGAGAATGACGTAGGTAATGACGGTGCGGTAATGATTCCTGGTGACAACGACGGTGATATTCAGTTTGTCCCTTCGTCCTCGACGCCACCTCCGCCACCAGCGAGTTCCGTCGAGGCTGTTAGTGACGGCGATGATGAAGACAAATCTGAACCAGTAACTACAACAACCACGTTGATACAAGAGCGTGAGAATAACAACGTTCCAGATCGTGATTTTCAGGAGGATCGACCTAAAGGTTCGGCGTCTAAACGGAGGTGCAGTGGTGGAGAATGA 513 0.5341 MNKKCELCKGPARIFCESDQATLCWDCDTQVHAANFLVARHSRTLLCRACHSPTPWNASGARLGNTISFCHRCAAEEETAENDVGNDGAVMIPGDNDGDIQFVPSSSTPPPPPASSVEAVSDGDDEDKSEPVTTTTTLIQERENNNVPDRDFQEDRPKGSASKRRCSGGE* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0494 170 CDD Bbox1_BBX-like 4 46 - -
Lan13g0494 170 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lan13g0494 170 PANTHER - 3 153 - -
Lan13g0494 170 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 153 - -
Lan13g0494 170 MobiDBLite consensus disorder prediction 144 170 - -
Lan13g0494 170 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lan13g0494 170 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lan13g0494 170 MobiDBLite consensus disorder prediction 79 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0494 Lan-Chr13 3649515 3650337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0494 1 75 C2C2-CO-like Transcription Factor Family AT4G27310 66.667 1.57e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan13g0494 zf-B_box 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0494 - - vun:114168631 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0446 7 3250917 3251583 Lan13g0494 13 3649515 3650337 LSH