Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0492 ATGGCCAACATTCATAAACCATGGTTCTGCTTTCCCTTTCTCACAATCTGCTTATTCTCTCTTCACACATACTCTTCCCTTGCAGCTTTGATCACCATCTCAGCAAACCAATCTCTTTCTGGTGATCAAACTCTTGTCTCCAAAGAAGGCAACTTTGGGTTGGGTTTCTTCAAGACAGGTAATTCCTCTAACTACTACATAGGCATTTGGTACATAAAGGTCACTGAACCCACATATGTATGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAGAATTCTGCCATGTTAACAATATCTAAGGGTAATTTAGTCCTCTTGGACCAGTCTCAAAATCTAGTTTGGTCAACAAATTTGAGTTCTCCTAGCTCAGATTCTTTAGTAGCAGTCCTTCTAGATAGTGGGAATCTTATGTTAAGCAATAGGCCTGATGCAACAGAATCAGAAGCACTATGGCAGAGTTTTGATCATCCAGCAGATACATGGCTTCCGGGTGGTAAAATCAAATTGGATAACAAAACAAAGAAGCCCCAATATCTCACTGCATGGAAGAACAATGAAGATCCTGCAACAGGCCTATTCTCTCTGGAACTAGACCCCAGTGGAACTCAGTCATATCTAATTCTTTGGAATAAATCTGAAGAATATTGGACTAGTGGCACTTGGAATGGACAAATTTTCAGCTTGGTTCCTGAAATGAGATTAAACTATATCTACAATTTCTCTTTTCATTCCGACGAGAATGAGAGCTATTTCACCTACTCCTTGTATAATACTTCAATTATATCTCGTTTTGTGATGGACATCTCGGGGCAGATCAAGCAATTCACATGGTTGGAGAGTTCTAAACAATGGAATTTGTTTTGGGCGCAGCCAAGACAACAGTGTGAAGTTTATGCTTTCTGTGGTGCCTTCGGGATCTGCAATGAGAACTCTATGCCATACTGCAATTGTTTGAGTGGTTATGAACCAAGGTCACAATCTGATTGGAGTCTTGGAGACCACTCAGGTGGATGTGTGAAAAAAACAAAGTTTCAATGTGAAACATCCAGTCTCTCTAATGGTGCCAAGGACAGGTTCCAGACAATGCTCAACATGAAGTTACCTGAACATGCACAATCTATGGCAGCAGGGAATGTAGAGGAATGTGAATTAACATGCTTCAACAGCTGTTCTTGCACTGCTTATGCTTATGGCAATAGCGGGTGCTCAATTTGGAATAGAGATCTCTTAAATATGCAACAGCTGAGTCAAGGCGATAGCAGTGGAGATACTTTGTTTCTAAGACTTGCAGCAACTGAGTTTCATGATTCTAAAAGCAGTAAGAAGATTATCATTGGTCTTGTTGCTGGTATTGTAGGGTGCATAGTTGTTATCCTAGTGCTTCTTCTAATTGTCATTCTGAGGAGAAGAAAGAGACACGTTGGAACAGAAACATCAATGGAAGGTTCAATGGTAGCATTCGCATACAGAGATTTGCAAAATGCAACAAAGAATTTCTCAGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTATTCAAAGGAACACTGACTGATTCAAGTGTCATAGCAGTTAAGAAACTTGAAAGCATTAGCCAAGGCGAAAAGCAGTTCAGAAGTGAAGTTAGCACAATTGGGACGGTCCAACATGTCAATCTTGTTAGGCTTCGAGGGTTCTGCTCTGATGGCGCAAGGAAGCTTCTGGTTTATGATTACATGCCAAATGGTTCTTTGGATGCCAATCTATTTCATGAAAAGAAGTCAGTATTGGAGTGGAAAATAAGGTACCAAATTGCTCTTGGAACAGCAAGGGGATTAACTTATCTCCATGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATGCTGAATTTTATCCAAAAGTAGCAGATTTTGGTCTGGCAAAGCTGGTTGGAAGGGATTTCAGCAGGGTCCTCACTACCATGAGAGGAACAAGAGGTTACCTTGCCCCAGAGTGGATTTCAGGAGTTGCCATCACTGCCAAAGCTGATGTTTACAGCTACGGAATGATGATTTTTGAGATTGTGTCAGGTAGGAGGAACTCTGAGCCATCAGAAGATGGCCAAATTAGGTTCTTTCCTACATATGCTGCAAACACATTGAACCAAGGTGGCAGTATACTTAGTTTATTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAGGAGGTGACTAGAGTCATAAAAATTGCTTCATGGTGTGTCCAAGATGATGAAACTCACAGGCCAACCATGGGTCAGGTAGTTCAAATCCTTGATGGGATCTTGAATGTGGCTATGCCTCCAATTCCAAGATCCCTTCAAGCCTTTGTTGACAACCAGGAGAACATAGTTTTCTTCATTGATTCCAATTCCACTCAGAGTTCACAGTAA 2418 0.4123 MANIHKPWFCFPFLTICLFSLHTYSSLAALITISANQSLSGDQTLVSKEGNFGLGFFKTGNSSNYYIGIWYIKVTEPTYVWVANRDNPVSDKNSAMLTISKGNLVLLDQSQNLVWSTNLSSPSSDSLVAVLLDSGNLMLSNRPDATESEALWQSFDHPADTWLPGGKIKLDNKTKKPQYLTAWKNNEDPATGLFSLELDPSGTQSYLILWNKSEEYWTSGTWNGQIFSLVPEMRLNYIYNFSFHSDENESYFTYSLYNTSIISRFVMDISGQIKQFTWLESSKQWNLFWAQPRQQCEVYAFCGAFGICNENSMPYCNCLSGYEPRSQSDWSLGDHSGGCVKKTKFQCETSSLSNGAKDRFQTMLNMKLPEHAQSMAAGNVEECELTCFNSCSCTAYAYGNSGCSIWNRDLLNMQQLSQGDSSGDTLFLRLAATEFHDSKSSKKIIIGLVAGIVGCIVVILVLLLIVILRRRKRHVGTETSMEGSMVAFAYRDLQNATKNFSEKLGGGGFGSVFKGTLTDSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSDGARKLLVYDYMPNGSLDANLFHEKKSVLEWKIRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDAEFYPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMIFEIVSGRRNSEPSEDGQIRFFPTYAANTLNQGGSILSLLDPRLEGNADIEEVTRVIKIASWCVQDDETHRPTMGQVVQILDGILNVAMPPIPRSLQAFVDNQENIVFFIDSNSTQSSQ* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0492 805 SMART ntp_6 355 430 IPR003609 -
Lan13g0492 805 CDD B_lectin 36 158 IPR001480 -
Lan13g0492 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lan13g0492 805 Pfam Protein kinase domain 501 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0492 805 Gene3D Transferase(Phosphotransferase) domain 1 573 776 - -
Lan13g0492 805 Pfam D-mannose binding lectin 78 184 IPR001480 -
Lan13g0492 805 SUPERFAMILY Protein kinase-like (PK-like) 483 794 IPR011009 -
Lan13g0492 805 CDD PAN_AP_plant 353 431 - -
Lan13g0492 805 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0492 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Lan13g0492 805 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Lan13g0492 805 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0492 805 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 797 - -
Lan13g0492 805 SMART blect_4 36 158 IPR001480 -
Lan13g0492 805 Pfam PAN-like domain 355 413 IPR003609 -
Lan13g0492 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 223 IPR036426 -
Lan13g0492 805 Gene3D Phosphorylase Kinase; domain 1 465 572 - -
Lan13g0492 805 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Lan13g0492 805 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
Lan13g0492 805 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 797 - -
Lan13g0492 805 CDD STKc_IRAK 504 770 - -
Lan13g0492 805 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Lan13g0492 805 Gene3D - 28 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0492 Lan-Chr13 3634763 3637818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0492 448 777 Receptor kinase-like Gene Family AT5G20050 40.934 1.93e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan13g0492 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0492 - - gmx:100305421 1262.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0448 7 3270119 3273220 Lan13g0492 13 3634763 3637818 LSH