Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0485 ATGACTCGCTACGACACCAACCCCTTCGAAGAAGAACAGGAGGTTAATCCATTTTCGGAGGAAACAGCTAAGGGAAAAAGGTCTGGGCCATCAAGTTATGGCGGAGGTGCATTTTATACCACTAAACCTGAAAGTGTTCCCTCTACAACCTCAAGTCTTTCACCCCTTCCTCACGAGCCTTATGATCGTGGGGCAACTATTGACATTCCTCTTGATAGCGCAAAGGACGTCAAAGCAAAGGAGAAGGAACTTCAGGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAAATAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTGTAGAGGAGAAAAATTGGCCACCTTTTTTCCCCATTATTCATCATAACATTGCAGATGAAATACCAATACACCTTCAAAGGGTCCAGTATGTTGCATTTACAACATGGCTAGGTCTGGTTCTGTGTCTTTTGTGGAATATCGTGGCAGTGACTACTGCGTGGATCAAAGGAGAAGGTCCAACAATCTGGTTCCTTGCTATAATCTACTTTATTTCTGGTGCTCCTGGATCCTACGTGTTGTGGTATCGCCCGCTTTATCGTGCAATGAGGACTGACAGTGCTCTCAAGTTTGGCTGGTTTTTCTTGTCTTATGCGGTGCATATTGCCTTTTGCATTTTTGCCGCTGTTGCTCCACCAATCATCTTCAAAGGAAAATCTCTCGCAGGTATATTGCCTGCTATCAGCGTGTTGGGCGACAATGCGTTGGTTGGGATATTCTACTTTATTGGGTTTGGATTATTTTGTCTGGAGTCACTTATAAGCATATGGGTTATTCAGCAAGTATATATGTACTTCCGCGGCAGTGGCAAGGCGGAAGAGATGAAGCATCAGGCTGCAAGAAGGACCGTGATGGCAGCCGTATGA 918 0.4488 MTRYDTNPFEEEQEVNPFSEETAKGKRSGPSSYGGGAFYTTKPESVPSTTSSLSPLPHEPYDRGATIDIPLDSAKDVKAKEKELQAKEAELKRREQEIKRREDAIARAGIVVEEKNWPPFFPIIHHNIADEIPIHLQRVQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLSYAVHIAFCIFAAVAPPIIFKGKSLAGILPAISVLGDNALVGIFYFIGFGLFCLESLISIWVIQQVYMYFRGSGKAEEMKHQAARRTVMAAV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0485 305 MobiDBLite consensus disorder prediction 1 67 - -
Lan13g0485 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 305 - -
Lan13g0485 305 Pfam SCAMP family 114 285 IPR007273 GO:0015031|GO:0016021
Lan13g0485 305 Coils Coil 74 104 - -
Lan13g0485 305 MobiDBLite consensus disorder prediction 42 56 - -
Lan13g0485 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 305 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0485 Lan-Chr13 3586774 3591675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0485 67 305 Miscellaneous Gene Families AT2G20840 84.100 3.19e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0485 K19995 - gmx:100796729 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0465 7 3400639 3405348 Lan13g0485 13 3586774 3591675 LSH
Lan6g1910 6 30082213 30087443 Lan13g0485 13 3586774 3591675 PCT
Lan13g0485 13 3586774 3591675 Lan6g1910 6 30082213 30087443 PCT