Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0483 ATGGGGAGTTGTGTTTCAACAAGCAGTAGGAGTACTTGTAGTAGCAGAAGCAATGGAGAAAAGGTCTCTCCATCTTGCTTAGATGTTGGATGCTGTGGGCAAAAGAGAGCAGCAAGGAGAACATTCTCTGATCATGTTATTTCTCTAGACCATTTACCATCCATACCCAGCCGAATCTTCACTAATGGAAAGAGCCAGTCTTCTTGCATATTCACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCAATGGTTGTATGGGAAGATTTCATGTCTGAAGATACGATCTTTTGTGGTGTCTTTGATGGCCACGGTCCATATGGTCATCTCGTTGCGCGCAAAGTAAGGGATGCTTTGCCATTAAAACTGCTTTCGTTTGTGAAGTCGTCCGAATCAAAGCAAAATGGAAATAGATCACGTAAAGCTTGGTTCGAAGGGAATATAAAACCTGATACTGAAGATTCTGAGCAGGATTGCTCTACCGAGGATAAACTGACTTCTACATGGAGAGAAGCTTTCTTGAAGGCATACAAGGCTATGGATAAAGAACTCAAGTCTCATCCTAATTTGGACTGCTTCTGTAGTGGGAGCACAGGTGTAACTTTAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAATATCGGGGATTCTCGAGCAATCATGGGATCTAGGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACGCTGCAAGGGTCGAGTATTTGCTTTGCAAGATGAGCCAGAAGTTCATAGAGTATGGTTGCCTTTTGATGATGCACCGGGTTTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACTGACAAAGATCAATTCATTGTTCTTGCCTCTGATGGGGTTTGGGATGTTTTAAGCAATGAAGAGGTGGTCGAGATAGTATCTTCAGCGCCATCACGGTCATCAGCAGCGAGGATTGTGGTAAATTCTGCTGCTCGAGAGTGGAACCTCAAATATCCTACTTCAAAGATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACAATCCAAAGCAACCATTCAGGAGGTAATCCAATTGAGTCAGATGATGGACAAAAATCCGAGCCATCTTTGCAAAGGAACTTCACCGTGAGATCCGCAGATGAAAATGAGACTAATGTAGCATCTGTTGAGGTTGAAGACGCGACATCAACGGCCGAGGATCAAAACTGGTTAGGTTTGGAAGGGGTCACCCGCGTAAACTCGCTAGTCCAACTTCCTCGGTTTTCCGAGGCCAAAAACTCTTGA 1419 0.4397 MGSCVSTSSRSTCSSRSNGEKVSPSCLDVGCCGQKRAARRTFSDHVISLDHLPSIPSRIFTNGKSQSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDALPLKLLSFVKSSESKQNGNRSRKAWFEGNIKPDTEDSEQDCSTEDKLTSTWREAFLKAYKAMDKELKSHPNLDCFCSGSTGVTLVKQGSNLFMGNIGDSRAIMGSRDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVSSAPSRSSAARIVVNSAAREWNLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGGNPIESDDGQKSEPSLQRNFTVRSADENETNVASVEVEDATSTAEDQNWLGLEGVTRVNSLVQLPRFSEAKNS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0483 472 ProSiteProfiles PPM-type phosphatase domain profile. 67 373 IPR001932 -
Lan13g0483 472 MobiDBLite consensus disorder prediction 383 444 - -
Lan13g0483 472 Gene3D - 59 381 IPR036457 -
Lan13g0483 472 CDD PP2Cc 66 373 IPR001932 -
Lan13g0483 472 MobiDBLite consensus disorder prediction 144 160 - -
Lan13g0483 472 SMART PP2C_4 56 371 IPR001932 -
Lan13g0483 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 461 - -
Lan13g0483 472 MobiDBLite consensus disorder prediction 1 24 - -
Lan13g0483 472 SUPERFAMILY PP2C-like 57 375 IPR036457 -
Lan13g0483 472 MobiDBLite consensus disorder prediction 137 160 - -
Lan13g0483 472 MobiDBLite consensus disorder prediction 384 444 - -
Lan13g0483 472 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 461 - -
Lan13g0483 472 MobiDBLite consensus disorder prediction 1 22 - -
Lan13g0483 472 Pfam Protein phosphatase 2C 131 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0483 Lan-Chr13 3561432 3565321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0483 1 466 PP2C-type Phosphatase Gene Family AT1G03590 68.565 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0483 - - lang:109351819 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0466 7 3406773 3410885 Lan13g0483 13 3561432 3565321 LSH
Lan8g1499 8 22028632 22030891 Lan13g0483 13 3561432 3565321 LSH