Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0469 ATGGCCTCCATGCCTTTGGGGCCGCACCACCACCAACCACCGTTACCGTCGGCGCCTCCACAACATCCTCAACCAGAAGTGCCTCGCCGGAGCTCCGACATGGAGACCGATAAGTTGCAGGATATGTCAGCTACTGTCATTGTACAGAATGATGCAGTCACTGGCCACATAATATCTACCACAATTGGAGGAAAAAATGGTGAACCTAAGCAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTCCAGGCGAAGTGCTTGGAAACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGTTACAAAAATCGTGAGCTTCAATTAATGCGCTTGATGGATCACCCAAATGTAATTTCTCTGACGCACTGTTTCTTCTCTACGACAAGTAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACGATGTACGGGGTTCTAAAGCACTACAACAATATGAACCAGAGAATGCCCCTCATTTATGTAAAACTATATACATATCAAATCTTTAGGGGACTAGCATATATCCATACGGTATCAGGAGTTTGTCATAGGGATGTCAAGCCTCAGAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTCGGGAGTGCAAAAGTTCTGGTCAAGGGCGAAACAAACATTTCGTACATTTGTTCACGTTACTACAGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTGTTGATATCTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGGGAAAATCAGGTGGACCAACTCGTGGAAATCATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATACGTTGCATGAACCCAAATTATACAGATTTTAGGTTCCCTCAGGTTAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCCCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGCTGCACTGCACTGGAAGCATGTACACATCCTTTCTTTGATGAGCTTCGTGAGCCAAATGCACGACCACCTAATGGTCGTCCACTGCCCCCGCTTTTCAACTTTAAACTGGAAATAGCTGGAGCATCACCGGAATTGATCAACAGGCTCATCCCAGAGCACGTTAGGTGGCAGACCGGTCTCAACTCCCAGAATTCAGCTGGTACATAG 1248 0.4575 MASMPLGPHHHQPPLPSAPPQHPQPEVPRRSSDMETDKLQDMSATVIVQNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLTHCFFSTTSRDELFLNLVMEYVPETMYGVLKHYNNMNQRMPLIYVKLYTYQIFRGLAYIHTVSGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGETNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACTHPFFDELREPNARPPNGRPLPPLFNFKLEIAGASPELINRLIPEHVRWQTGLNSQNSAGT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0469 415 Gene3D Transferase(Phosphotransferase) domain 1 155 402 - -
Lan13g0469 415 PANTHER OS02G0236200 PROTEIN 30 406 - -
Lan13g0469 415 MobiDBLite consensus disorder prediction 9 26 - -
Lan13g0469 415 SMART serkin_6 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0469 415 SUPERFAMILY Protein kinase-like (PK-like) 74 384 IPR011009 -
Lan13g0469 415 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
Lan13g0469 415 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0469 415 MobiDBLite consensus disorder prediction 1 38 - -
Lan13g0469 415 CDD STKc_GSK3 70 362 IPR039192 -
Lan13g0469 415 Gene3D Phosphorylase Kinase; domain 1 60 154 - -
Lan13g0469 415 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 30 406 - -
Lan13g0469 415 Pfam Protein kinase domain 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0469 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0469 Lan-Chr13 3449073 3454057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0469 79 397 MAP Kinase Gene Family AT3G59790 33.939 2.88e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lan13g0469 Pkinase 7.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0469 K14502 - gmx:100810924 744.962