Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0450 ATGGGGTTTTTGTTGAAGGAAGCTTTGAAAACTCTCTGTGCTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCAACAATCCAAAGTTGTTAATATGGGAAGATTGCTATTATGAACCATTGCCGTCTAATTTGCCTTACCAAGATGGGGAAGGATGCTGGTTTTCTTCCGAGTATCAGCCGGGGATTCAAGAAGAGGATAAAGTATGTTCTTTGATTAACAAAATGGTGGTGAATAGTTCTGTCAATATCATTGGCGAAGGGATAATTGGACGGACAGCATTTACAGGAAACCATATGTGGATTCTTTTGAACAATTTCACTAGAGATGCATTTCCACAAGAGGTATATACTGAGTTGCATTACCAATTTTCAGCTGGAATACAGACACTAGCTGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAAAATATGGGATTTGTGAATGACACGAAGAGCTTGATCTTGCAATTGGCATGTATTCCTGGTGTCCTTCTATCTGATGACTATTCAGCAAAACTTTCTCCCGAAAGACTTGCTGGACCTGTGACTGTTTGTGTGCCAGTGACTATTGATCCACCAGTTGTTAGCTCTAACTGCACTCCCTCTGTAACTAATTGTTCCAATGAAATAAGTAACTTCTCTCATGCTTCTTCAAGGCCTATTGCTCAACCCATAAATAATTACCAGGGTTCTGTATTGACACCTCAAATGCAGAACCAAAACAAGATATCATCCAAGTACCATGATAATCCTTGCCACCCAATGGCTCATTCAATAAATAGAACAAGTGTCAGTACCCAACAAGAGAGTAGAGTTGTCGTGGCTAGAGCCGAAGTGATACCCTCAAATCTCGATTCATATGCATTCAATGACTTAGCTGGTTTTGGGCAATCAAACTTCAGTGATGGCAGCCTTAAATATATGGAACAACAAATCTTATCAAGTGTTGGGACACAAGTTCATGTTAATCCTAATATGAATCTATCAAGTACCTATAATATTTCCCAATTGAAAAGAGATGGAAGCCATATTCTTCAACAGACCCAGAGTTGTGTTAGTAATTCAATACTTGGAGGAATTCCAATCCATAACAGGATGAGTAATCTTTTGCGGACAAATATGTTTAACAGCTCTGTTTCAAACTCTCCCAAAGTATCCACCACTGATTTTTCCGGAATACAAAAAGTTAGTGTGGGACTTCAAAATGATAATTCAACTAAAGCTGGGACTTATTCTCTGCCTAATTTGACTAATCAAACAGTTCCTAGTCATATGCATCTAGAAGGTTCTCATCAGAAGAATCTTCCCACAGATTTAAGTCATGCTCATGATGTTTTGGCTACAACAGATCAAAGGATTGATGATGATTTGCTTCAGGCCCTTAAGATCCCATCTCTTCATCTTGAGGAGCATGTGGCTATGAGTGACCAAATCCCTGGTTTAGTTCATGATCACCTTAATGAAGATAGTTCCAGTCAACATATGATGAAAATGAATGCTAAGCAAGAAACTAGTGCTCAACTTCCATCAGATGATGACCTATTCGATGTTTTAGGTATGGATTTCAAAAGGAACCTGCTGAATGGAAACTGGGATGAGTTGCTTGCCGATGAAAATATTGATAAAAAGGCAACATGCATGAACATGCAGGCTATAGATCCTGATAATAGTTATTCAGTTAGTGAAGCAATATCAGACAGTGGCATCTTCTCTGGGTCTGGCACTGACCACCTCTTAGATGTTGTGGTTTCAAGGGCTCAATCTGCTTCAAAACAGAATTCTGATATATCTTGCAGAACAACATTGACAAGGACTAATACCGCTTCCGTTCCCTCTCCTGTCTCCAAGCAGGTTATGCCTGATAATGTTGTCAAGGGGAAAGTGATTAATTTCCCTAAGATGGAGGGCAAAATAGGTGCTGCACAAACTAGTTCTCTTAAGTCTGTGTGTAGCAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCATATACGGGTCTCAACTTAGTTCATGGGTTGAGAAAGTTAACAATGTGAAGCATGAAAGTAGTGTTTCAACTGGATATTCTAAGCGGCCAGATGAAGGTTGCAAGTCCAACCGGAAAAGGTTTAAACCTGGAGAGAACCCCAGGCCTAGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTTTGGAAAGGACCATCAAGCATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACCGGGGAGTCAAAGATTATTAGCAAGGAAGGTGGATTGCTTTTGAAAGATAACTTTGATGGAGGGGCTACATGGGCATATGAGGTTGGTTCACAATCAATGGTTTGCCCTATCATAGTGGAGGATCTGAATCCTCCTGGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGCGGTTTCTTTCTTGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACTATCTTGAAAGGAGTCATGGAAGCTCGTAATGACAAGATCTGGGCACACTTTGTTGTTGAGGCAAACAGAGACGTAACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGAGCAAACAGTGAAGGGCGGTGCATCTTCATCGAACGCAATTGATAACAACATGATGGTTCATCATTCTTTCCCACAAACTACCCATATAGCAACAACAGGTAGGCCTAGTAGTTTGCAATGA 2793 0.406 MGFLLKEALKTLCARNQWSYAVFWKIGCNNPKLLIWEDCYYEPLPSNLPYQDGEGCWFSSEYQPGIQEEDKVCSLINKMVVNSSVNIIGEGIIGRTAFTGNHMWILLNNFTRDAFPQEVYTELHYQFSAGIQTLAVIPVLPHGVVQLGSFLPIMENMGFVNDTKSLILQLACIPGVLLSDDYSAKLSPERLAGPVTVCVPVTIDPPVVSSNCTPSVTNCSNEISNFSHASSRPIAQPINNYQGSVLTPQMQNQNKISSKYHDNPCHPMAHSINRTSVSTQQESRVVVARAEVIPSNLDSYAFNDLAGFGQSNFSDGSLKYMEQQILSSVGTQVHVNPNMNLSSTYNISQLKRDGSHILQQTQSCVSNSILGGIPIHNRMSNLLRTNMFNSSVSNSPKVSTTDFSGIQKVSVGLQNDNSTKAGTYSLPNLTNQTVPSHMHLEGSHQKNLPTDLSHAHDVLATTDQRIDDDLLQALKIPSLHLEEHVAMSDQIPGLVHDHLNEDSSSQHMMKMNAKQETSAQLPSDDDLFDVLGMDFKRNLLNGNWDELLADENIDKKATCMNMQAIDPDNSYSVSEAISDSGIFSGSGTDHLLDVVVSRAQSASKQNSDISCRTTLTRTNTASVPSPVSKQVMPDNVVKGKVINFPKMEGKIGAAQTSSLKSVCSKDDAGNCSQTTSIYGSQLSSWVEKVNNVKHESSVSTGYSKRPDEGCKSNRKRFKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFDGGATWAYEVGSQSMVCPIIVEDLNPPGQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWAHFVVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAIDNNMMVHHSFPQTTHIATTGRPSSLQ* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0450 930 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Lan13g0450 930 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 930 - -
Lan13g0450 930 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 717 766 IPR011598 GO:0046983
Lan13g0450 930 MobiDBLite consensus disorder prediction 695 731 - -
Lan13g0450 930 CDD bHLH_AtLHW_like 721 790 - -
Lan13g0450 930 MobiDBLite consensus disorder prediction 707 731 - -
Lan13g0450 930 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 930 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0450 Lan-Chr13 3275737 3282426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0450 525 905 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.435 1.10e-117 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0450 - - aprc:113857443 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0395 7 2694801 2701411 Lan13g0450 13 3275737 3282426 LSH
Lan8g1579 8 22844123 22850436 Lan13g0450 13 3275737 3282426 LSH