Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0446 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAACAGATCGGTCGAGGAGCTTTTGGAGCTGCTATTCTTGTTCATCACAAGGCAGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTTGCAAGGCAGACTGAAAAATGCAGAAGATCTGCACATCAAGAGATGGCTCTTATTGCGCGAATCCAGCACCCTTATATTCTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAGATCAAATGGTGCTTACTTTCCTGAAGAGAAACTCTGCAAATGGTTCACTCAGATACTCTTAGCAGTGGAATACCTGCATTCAAATTATGTGTTGCATCGTGACCTAAAGTGTTCCAACATCTTTCTTACTAAGGATCAGGATGTTCGCTTGGGGGATTTTGGGCTCGCAAAGACTCTAAAAGCAGATGATCTGGCTTCTTCGGTAGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTTAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCATGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAATCGATCCTCTATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAATACTGATAAAGAGCATGTTGAGAAAAAGTCCCGAGCATCGACCAACAGCATCCGATGTGTTAAAGCACCCTTATTTGCAACCGTACGTTCAACAATATCGACCATCTTTTAATCCTCCTCCAATATCCCGTTCTCCTGAAAAACCAATTTCTTCTGTACACCGTCCTAGAAAACATATGGCTGAAAGTCAAAACAGTAATAGTTCAAGTAGTGACAAAGATAGTTTGATGTCAAATGAGAGAAACATTGCCACACCAGTGCCGAGGTGTGATAACAAAGGCACTGACACAGATGTGACATCAATAGACGATGATGGCTCAGAGCACCTCCTGCCTTGTGAGCAAGAAAGTTACTCTAGCAATGCCAATACCAAAACAGTTGAACAAGACTTGAAGAAACCATCTCATAGTGAACAGCGTTCGAATGTTGAACCTAAGCAGCCAAAAACAGTTAGGAATATAATGATGGCATTAAAAGAGGGAAAGGTTAGAGAAACAACTTCTCCGATGAGAGGTAGCCGCGTAAAGGCTGGTGGTGTACTAACGCAGAAAATAAATACAGAGACATTGTCCAGATTGCCTAAGCCGATTTTTGGTTCTCCCGGTTCGAAGCCTAATTTAGAGCCACCAACTGCAGCACTTGCGAGGGCAACCCCTGATTCTGTAAAGCGAATACCTGGTTCACATCCTCCAAAGCATCAGTTACCGATGACAGAATCCACACCAAAAACTAAACCAAGACATGATTCGACTCCACTATCTGCTCTTATCAAACAAGTAGAAGGAGATGGAGTTCCTTCCAAGGCAAGGCTAAGAACTCCTCCAAGCTTACTTAGACGACCTTCATTTCCTACAATAATGAGGTTGGCTGGGTTTGATGTTCCAAATGCTGCAACTGATACTGGGAAGCTAGGTCCAAATAAAGTAGCTCAGGAACCTGAGATAAGCCATTGTCAGTTGACTAATGGCAATGTACCAATTTCTAGACAGTCTCGGAATGATTTTGGAAGAAGTTCCAAAGGAATACAAACAGACAGCAGTAATTCTGCCTCATCTTCAGTCTCTATGCATGGATTTGAACTTTCCGATGATGCAACAACTTTTATTGACTTGAGAGAACAGGTACTTCCTGATCATGTGAGTGTAGGTGTGGAATCAAGTCCAGACAGCATGCCACTTGCAACCTGTTCACACGATAAGATGGTTGAACAAGTGTCTGGAGAGACCCTTGAGGTTACCCTGGATTATCAGAATAATATTGGCAAAAATGAGATAGTTAGTCCCAGTTTAACTCTTGATCACCCTGTTCAAGATTCTATGGTGGAAGATGGTCTTCACATAAATCAGACAACTATATTTGCTGCCTCCGGGAATGGTAATAGATCTGCTGACCCCCCTGCTGAAGCCACAAAAGAAATCGAAGATCTTCAAGATATTTCTACTGAAATGGTTTTAACTAACTCTCTCAAACATCCACTCCCAAATTCTGGAGTTTGTGACGTTAGTCCAGAAAGCAAGCCTGATACAGTTAGCCAGCCAAAACTAGCGCGTAACTCATCTGGCGATGACAAATTTACGGTGAAGGAGCGATTGTCAATGGTGGCTGAAACTGCTCCACTGATTACCACTACTAAAATACCAAGCCAGGAAGTTTTGCAAGAGAAAGGAACATTGTTACAGAATCCAGCACAAGAAAAGCCTGACGCTGGACATCTTCCTCCAGCCTTTGACGATATCATCCATGTTATACGCCATAGCAGTTACCGAGTTGGGAGTGATCAGCAGCAGCCAGTAAGGGAAACTGTGGAGATGGGGGTTCAAAATGTAGATGTTGGTAAGTTTATCAATGGTTTGAGGGATGATTTAGAAACGAGAAACATGAGCTCTCCTAAGACCCTTCAATCATCAAGTTGCGCTGAAGCTGCAAGCATTAAATCAAATATTTCCGATCACTGTGAAATGAGAAACACGAACACCCCTGCCACCCTTAAATCTTCAAGCATTTCCGATGCCTTGAGCTCAAAATCGAGTATCTCTGATCATCCCAATCTTAAGGAACAGGATATGAGTAACCATGTTTCTTTAGTTTCAGAGTCTGATTCGACCGAGTTAAGAAAAAATAACACTCCAGTGACTGAAGACAAACCACCAGCATCAAAGGAAATATTGGATGTAAAATCTTTCAGGCAGAGAGCCGAGGCACTCGAAGAGCTTTTAGAATTGTCTGCAGATTTGTTGAAGCAAAATAAATTGGAGGAACTTCAAGTTGTTCTAAAGCCTTTCGGAAAAGATAAGGTCTCTCCAAGGGAGACAGCTATTTGGTTAGCCAAGAGTCTTAAAGGAATGTCATTTGAGGAAAGTGGAGGACGTTGTTCATGA 3087 0.4231 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTEKCRRSAHQEMALIARIQHPYILEFKEAWVEKGCYVCIVTGYCEGGDMAELMKRSNGAYFPEEKLCKWFTQILLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRHAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKSMLRKSPEHRPTASDVLKHPYLQPYVQQYRPSFNPPPISRSPEKPISSVHRPRKHMAESQNSNSSSSDKDSLMSNERNIATPVPRCDNKGTDTDVTSIDDDGSEHLLPCEQESYSSNANTKTVEQDLKKPSHSEQRSNVEPKQPKTVRNIMMALKEGKVRETTSPMRGSRVKAGGVLTQKINTETLSRLPKPIFGSPGSKPNLEPPTAALARATPDSVKRIPGSHPPKHQLPMTESTPKTKPRHDSTPLSALIKQVEGDGVPSKARLRTPPSLLRRPSFPTIMRLAGFDVPNAATDTGKLGPNKVAQEPEISHCQLTNGNVPISRQSRNDFGRSSKGIQTDSSNSASSSVSMHGFELSDDATTFIDLREQVLPDHVSVGVESSPDSMPLATCSHDKMVEQVSGETLEVTLDYQNNIGKNEIVSPSLTLDHPVQDSMVEDGLHINQTTIFAASGNGNRSADPPAEATKEIEDLQDISTEMVLTNSLKHPLPNSGVCDVSPESKPDTVSQPKLARNSSGDDKFTVKERLSMVAETAPLITTTKIPSQEVLQEKGTLLQNPAQEKPDAGHLPPAFDDIIHVIRHSSYRVGSDQQQPVRETVEMGVQNVDVGKFINGLRDDLETRNMSSPKTLQSSSCAEAASIKSNISDHCEMRNTNTPATLKSSSISDALSSKSSISDHPNLKEQDMSNHVSLVSESDSTELRKNNTPVTEDKPPASKEILDVKSFRQRAEALEELLELSADLLKQNKLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMSFEESGGRCS* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0446 1028 MobiDBLite consensus disorder prediction 924 942 - -
Lan13g0446 1028 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1011 - -
Lan13g0446 1028 Gene3D Transferase(Phosphotransferase) domain 1 90 328 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 332 347 - -
Lan13g0446 1028 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1011 - -
Lan13g0446 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lan13g0446 1028 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0446 1028 MobiDBLite consensus disorder prediction 909 953 - -
Lan13g0446 1028 SUPERFAMILY Protein kinase-like (PK-like) 4 305 IPR011009 -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 725 758 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 556 591 - -
Lan13g0446 1028 CDD STKc_Nek 7 262 - -
Lan13g0446 1028 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lan13g0446 1028 Coils Coil 971 991 - -
Lan13g0446 1028 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0446 1028 MobiDBLite consensus disorder prediction 269 385 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 298 318 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 349 364 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 457 513 - -
Lan13g0446 1028 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 741 755 - -
Lan13g0446 1028 MobiDBLite consensus disorder prediction 365 381 - -
Lan13g0446 1028 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0446 1028 MobiDBLite consensus disorder prediction 428 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0446 Lan-Chr13 3236604 3243294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0446 14 263 MAP Kinase Kinase Kinase AT1G53570 30.980 2.72e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lan13g0446 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0446 K08857 - gmx:100818747 1446.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0392 7 2655909 2662445 Lan13g0446 13 3236604 3243294 LSH