Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0431 ATGGATAATCAAAGAATAGGACAAATGGGGTTATCTGAGTCAGGACCATCAAGTCACCATGTCCCTTATGGAGTTCTTCATCATGGGATTAATATTCCTACATCAAGCTTAATGAATCAAGGGTCTGCTTTTGATTTTAGAGAGCTAGAAGAGGCAATGGTTCTGCAAGGAATTAAAACTAGAAATGATGAAGCAAAAGCATCTTTATTCACAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTTCACCAAACCCCTAGAGGAAGTTCAAAATCAAGAGGGGAAAGCACTGATTCAGGATCAGGTATAAACACTATTTGTTCAAGCAAAACAACTGAGCCACCACAATTTGAAACAGAATCTCCAATAAGTAAAAAGGCATCTTCTTCAGATCAACATCAAAGACAGAACCAACTTCAACAACAAGACATCATGACAATTGTTGCCTCAAGAACAAGCCCATCATCACAGAATCAATCAGCTGCAAAAACAACAATACAGGATAAGAGGAAGGGAGCTAGTTCCACATCAGAAAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCACAGAACAGAGAGGCAGCAAAGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTTAACCAACTCGAACAAGACCTTCAAAGAGCACGTTCTCAGGGAATGTTATTGGGTTGTGGTGGTACTGGTGGAAATATAAGCTCTGGAGCTGCAATGTTTGACATGGAGTATAGTAGATGGTTAGAAGATGACCACCGGCTGATGGCTGAGCTCCGGACGGGGCTACAGGCGGCGGTATCGGACAACGAGCTGAGAGTGATAGTAGATGGATATCTTGGTCACTATGATGAGATATTCCGGCTGAAAGGGGTGGTTGCTAAAACAGATGTATTTCACCTTATTAATGGTATGTGGAGGTCACAAGCTGAACGTTGCTTCCTATGGATTGGTGGTTTTAGACCCTCAGACCTAATCACTATGTTGATACAACAGTTGGAGCCACTAGCGGAGCAGCAGATAATGGGAATGTATGGGCTCCGCCATTCATCACACCAAGCGGAGGAAGCTCTCTCTCAAGGCCTTGAACAGCTCCAGCAGTCTCTCATTGAAACCATCTCCGGCGGCCCAGTCGTAGACGGTGTCCAACAGATGATGGTCGCCATGGGCAAGCTTTCCAACCTTGAAGGCTTTGTACGTCAGGCTGATAATTTGAGACAACAAAGCCTCCATCAAATATGTCGATTATTGACAATTCGTCAAGCAGCAAGGTGTTTTCTTGTCATTGGAGAATACTATGCTCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGGCCACGAGAGACCATGATGGTGGATGATAACTCATGTCAAACAACCACCGACTTGCAAATGGTTCAATCTTCTCAAAATCATTTCCCAAGTTTCTGA 1479 0.4395 MDNQRIGQMGLSESGPSSHHVPYGVLHHGINIPTSSLMNQGSAFDFRELEEAMVLQGIKTRNDEAKASLFTGKPAATLEMFPSWPMRFHQTPRGSSKSRGESTDSGSGINTICSSKTTEPPQFETESPISKKASSSDQHQRQNQLQQQDIMTIVASRTSPSSQNQSAAKTTIQDKRKGASSTSEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLNQLEQDLQRARSQGMLLGCGGTGGNISSGAAMFDMEYSRWLEDDHRLMAELRTGLQAAVSDNELRVIVDGYLGHYDEIFRLKGVVAKTDVFHLINGMWRSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSHQAEEALSQGLEQLQQSLIETISGGPVVDGVQQMMVAMGKLSNLEGFVRQADNLRQQSLHQICRLLTIRQAARCFLVIGEYYARLRALSSLWASRPRETMMVDDNSCQTTTDLQMVQSSQNHFPSF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0431 492 MobiDBLite consensus disorder prediction 83 192 - -
Lan13g0431 492 MobiDBLite consensus disorder prediction 1 20 - -
Lan13g0431 492 Pfam bZIP transcription factor 189 230 IPR004827 GO:0003700|GO:0006355
Lan13g0431 492 MobiDBLite consensus disorder prediction 1 15 - -
Lan13g0431 492 Coils Coil 209 236 - -
Lan13g0431 492 MobiDBLite consensus disorder prediction 89 177 - -
Lan13g0431 492 SMART brlzneu 186 262 IPR004827 GO:0003700|GO:0006355
Lan13g0431 492 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 232 IPR004827 GO:0003700|GO:0006355
Lan13g0431 492 ProSiteProfiles DOG1 domain profile. 253 461 IPR025422 GO:0006351|GO:0043565
Lan13g0431 492 PANTHER TRANSCRIPTION FACTOR TGA9 66 471 - -
Lan13g0431 492 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Lan13g0431 492 Pfam Seed dormancy control 271 345 IPR025422 GO:0006351|GO:0043565
Lan13g0431 492 MobiDBLite consensus disorder prediction 178 192 - -
Lan13g0431 492 Gene3D - 189 240 - -
Lan13g0431 492 SUPERFAMILY Leucine zipper domain 190 232 IPR046347 GO:0003700|GO:0006355
Lan13g0431 492 CDD bZIP_HBP1b-like 190 241 - -
Lan13g0431 492 PANTHER TRANSCRIPTION FACTOR TGA9 66 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0431 Lan-Chr13 3114864 3123127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0431 160 492 bZIP Transcription Factor Family AT1G08320 72.455 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan13g0431 DOG1 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0431 K14431 - gmx:100775461 719.924