Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0393 ATGAAGCTGCAGCTCAAATTTGCTTTTGCTTTTGTTATTAGCTTGCACTGTATTCAACACTCATTCTGTGACAAACCTTCTAATACCTCTGCTCTAAGCAAGTGGAAATGTAGATGTTCTTCCTTCCAAGGGAACCAAAGCTACTCTCTTGCTAATTGTTCTAGGTCATGTGATTGCCACCCAGATGCAGAGGAGAGTGCGTCCATATGGACATGCATATGTGATCCCGATGGGTTTCCCGAAGTGGCAGCTGATGGTCATAGCCCTAAATGCTTTACTGCCTGCAACTGCAGCTGGGGTACTGTCAGTATGCCAATAGGTTCAAAGAAACAAATTCCGAGCAAGATTGTTGTAGTTATTCTATTAATATGTGTTTTGTGCACAACCCTTGCGTTTCTCATCTCAGTTATATTTTATGTCTACCGAAGAGATAGATGTCCTATTCGATCACCATCATCCTCATCAGGTAAGGAAACAAGCAGTGGTAGTACAACCAACTTAATTAGTCATAGGACAGCGGCATCTTCGGTGCCAGAAACAAGAGTTACCACAAATTCTCCTATTTGTCATATTATAGGATGCTTTCCTAAAGGCTCTTTTATGTTTGGGAGCCGAAAAGAAACTTTTCATGGAAATATTATTCAATTTTCGTTTGATGTACTAGAGAATGCCACTGAAAACTTTTCAGCCTCAAACCTAATTGGATTAGGTGGAAGTAGTTTTGTATACCGTGGTCGGCTGAAAGATGGTAGTGATGTGGCAGTTAAGCGACTAAAAGATCAAGGAGGGCCGGATGCAGACTCTGCATTTTTCAAAGAGATTGAACTATTATCTAGACTTCATCATTGTCATCTGGTGCATTTACTTGGATACTGTTCAGAATTAAAAGGAAAACTTGTTCAGAGGTTACTGGTATTTGAGTACGTTACTCGTGGAAATCTGAGGGACTGTTTGGATGGAGTTGCCGGAAACAATTTGGATTGGGCTACTCGTGTTACAATCGCAATAGGAGCTGCAAGGGGCTTGGAATATCTACATGAAGCAGCTGATCCAAGAATTCTTCATAGAGATGTTAAATCATCAAACATTCTTCTGGGTGAAAATTGGCATGCAAAGATAAGTGATCTTGGTATGGCTAAAAGCTTGACATCTGATGACCTCCCCAGCTGTTCAAATTCTCCAGCTAGAATGCAGGGAACATTTGGCTATTTCGCACCCGAGTATGCTATTGTTGGGAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGTGGCCGGAATCCCATCCATAAATCTACGGGCAAAGTAGAAAGCCTTGTCGTATGGGCTGTTCCGCGTTTACAGGATAGGAGGCGAGTCATTACGGAGTTGATTGATCCAAAATTAAATGGAAACTTCCCAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAGGGAGTGTTTGCTGTTGGATCCTGACACTCGACCAACCATGAGTGAGGTCGTTCAAATTCTTTCTAGTATCTCCCCCGGCAAATCTAGGAGAAGAAGAAATATTTCCGCGAGCCTGTTTCGGGAACAAGAGGATGCAGCGAAGCAAAGACATGCTCTATCTCATAGTTCATTGACACTAGATATTGATCACAAAAATAAAGAAGCAGATGGGCATGAAGATAATATTATGCTCTTGACTTCAAAAACTAAGAGATGGCAGACATCAGAAGAAGAAATGGTAGACCTGACCGAACCTCGGTTTGAATCATTTTGCATCGCACCTACATGA 1788 0.4189 MKLQLKFAFAFVISLHCIQHSFCDKPSNTSALSKWKCRCSSFQGNQSYSLANCSRSCDCHPDAEESASIWTCICDPDGFPEVAADGHSPKCFTACNCSWGTVSMPIGSKKQIPSKIVVVILLICVLCTTLAFLISVIFYVYRRDRCPIRSPSSSSGKETSSGSTTNLISHRTAASSVPETRVTTNSPICHIIGCFPKGSFMFGSRKETFHGNIIQFSFDVLENATENFSASNLIGLGGSSFVYRGRLKDGSDVAVKRLKDQGGPDADSAFFKEIELLSRLHHCHLVHLLGYCSELKGKLVQRLLVFEYVTRGNLRDCLDGVAGNNLDWATRVTIAIGAARGLEYLHEAADPRILHRDVKSSNILLGENWHAKISDLGMAKSLTSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRNPIHKSTGKVESLVVWAVPRLQDRRRVITELIDPKLNGNFPEEEVQIMAYLARECLLLDPDTRPTMSEVVQILSSISPGKSRRRRNISASLFREQEDAAKQRHALSHSSLTLDIDHKNKEADGHEDNIMLLTSKTKRWQTSEEEMVDLTEPRFESFCIAPT* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0393 595 SMART serkin_6 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0393 595 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 591 - -
Lan13g0393 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Lan13g0393 595 Gene3D Transferase(Phosphotransferase) domain 1 309 532 - -
Lan13g0393 595 Gene3D Phosphorylase Kinase; domain 1 202 308 - -
Lan13g0393 595 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Lan13g0393 595 SUPERFAMILY Protein kinase-like (PK-like) 209 507 IPR011009 -
Lan13g0393 595 Pfam Protein tyrosine and serine/threonine kinase 232 507 IPR001245 GO:0004672|GO:0006468
Lan13g0393 595 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0393 595 PANTHER OS01G0253100 PROTEIN 2 591 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0393 Lan-Chr13 2668201 2674623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0393 1 592 Receptor kinase-like Gene Family AT2G28250 52.087 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lan13g0393 PK_Tyr_Ser-Thr 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0393 - - lang:109351663 938.332