Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0376 ATGTTCAATAAGACAAGTTCTTTTGCCAAAGCGATGGGCTGTTGTAATTGCTTCGGGTTCATCAGGAGACGGAGACGCCAAAGGCCTAACCCCACCATCAACAACAATAATAAGAATCTCTCCCAGGAGCTGTTGTTGGATGATGACATTGACGACGATGATCATTCGTATAATGACAGTGCTACCAACGCCAGTAGTGGGGATGAGAGTGAGTTGCAAGCTCGTCCCAAACGATCAGAGGATATTTTGAATTTGAGAGTAGAGAATGACACGATGTGTAGGCAGTATCCTGTTAAGGAGACTCGGAAACTTTTTCGCACAGAGGATGAAAACGGGAACAAGATGTTAAATGAGTATGTTCGTGAGTGTAAGATTGGTTCCGGCAGCTACGGGAAAGTGGCCCTCTATCGAAGCTCAGTCGATGGAAACCATTATGCAATAAAGGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGACTGATGTCCTACGCGAGGTGCTCATTATGAAAATGGTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCGGATCGCTTCTACATGGTACTTGAATATGTGGAGGACAAATGGGTTTGCCTGGGTACGGGTCCTGCTTGTGGCTTGGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTGTCATATCTCCATTCTCATCGCATAGTACATGGGGATATTAAACCTGATAATCTGCTGATTACTCGTCACGGTACAGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGAGCTTCGACGATCACCTGGCACTCCCGTTTTCACCGCACCAGAATGTATTCTAGGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGAATTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTTGGAGACACACTTCAAGATACATATGACAGGATAGTCAATAATCCTATAGTACTCCCAAATGATATGAACCCACAATTAAAGAACTTAATAGAAGGACTACTTTTCAAAGATCCAAGACTAAGGATGACATTGAGTGATGTTGCGGAGCATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGGGTACCTGTGTTGGTGCCAAAGGAAGTGCTCGGAAAGGGAAGACGCTGAATAG 1218 0.4417 MFNKTSSFAKAMGCCNCFGFIRRRRRQRPNPTINNNNKNLSQELLLDDDIDDDDHSYNDSATNASSGDESELQARPKRSEDILNLRVENDTMCRQYPVKETRKLFRTEDENGNKMLNEYVRECKIGSGSYGKVALYRSSVDGNHYAIKAFHKSHLLKLRVAPSETAMTDVLREVLIMKMVEHPNIVNLIEVIDDPESDRFYMVLEYVEDKWVCLGTGPACGLGEETARRYLRDIVSGLSYLHSHRIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECILGLTYHGKAADTWAVGITLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPNDMNPQLKNLIEGLLFKDPRLRMTLSDVAEHSWVIGDDGPIPGYLCWCQRKCSEREDAE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0376 405 Gene3D Transferase(Phosphotransferase) domain 1 218 386 - -
Lan13g0376 405 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 404 - -
Lan13g0376 405 SMART serkin_6 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0376 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Lan13g0376 405 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lan13g0376 405 Pfam Protein kinase domain 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0376 405 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 404 - -
Lan13g0376 405 Gene3D Phosphorylase Kinase; domain 1 113 213 - -
Lan13g0376 405 CDD STKc_LKB1_CaMKK 125 380 - -
Lan13g0376 405 MobiDBLite consensus disorder prediction 51 77 - -
Lan13g0376 405 ProSiteProfiles Protein kinase domain profile. 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0376 405 SUPERFAMILY Protein kinase-like (PK-like) 115 387 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0376 Lan-Chr13 2536225 2541146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0376 125 379 CBL-interacting serine-threonine protein kinases AT5G35410 33.462 5.05e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Lan13g0376 Pkinase 5.9e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0376 K00908 - gmx:100789178 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1675 8 23678504 23684164 Lan13g0376 13 2536225 2541146 LSH