Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0365 ATGAAGAGTTGTGACACAAGCACCCCTGTTTCCTCTACCCTACTTTCTCAGTCTCCTACTAATTCATCATCTTCTTTTCCAATTACTCCTCCTCAAGTTGTTATGATCCCTTGTGCTGCCTGCAAAATTTTGAGAAGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTCAACCTGCTAAGTTTACCATTGCCCACCGTGTCTTTGGTGCTAGCAACATCATCAAGCTCTTACAGGAACTTCCAGAGTCTCAAAGAGCTGATGCAGTGAGCAGCATGGTTTATGAGGCTAGTGCAAGAATAAGAGACCCAGTTTATGGTTGTGCAGGTGTAATTTGCAACCTCCAAAATCAGGTGAATGAACTTCAAGCACAATTAGCTAAGGCACAAGCTGAAGTTGTAAACATGCAAGTCCAGCAAGCAAATCTTATGGCACTAATATGCATGGATGTGGCACAAAGTCCACATGAATTATCACCACAACAATCAATGGATAATTTCATTTCAAGTCCTCCACATAGTAGTGACTATCAAAGCAGTGCAAATTTCTATGAGGAGAACTCTAGCTTGAATTTGTTGTGGGATCAGCCTCTTTGGACGTGA 615 0.4228 MKSCDTSTPVSSTLLSQSPTNSSSSFPITPPQVVMIPCAACKILRRRCAEKCVLAPYFPPTQPAKFTIAHRVFGASNIIKLLQELPESQRADAVSSMVYEASARIRDPVYGCAGVICNLQNQVNELQAQLAKAQAEVVNMQVQQANLMALICMDVAQSPHELSPQQSMDNFISSPPHSSDYQSSANFYEENSSLNLLWDQPLWT* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0365 204 Pfam Lateral organ boundaries (LOB) domain 37 134 IPR004883 -
Lan13g0365 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 200 - -
Lan13g0365 204 Coils Coil 116 143 - -
Lan13g0365 204 MobiDBLite consensus disorder prediction 1 25 - -
Lan13g0365 204 ProSiteProfiles LOB domain profile. 36 137 IPR004883 -
Lan13g0365 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 24 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0365 Lan-Chr13 2443454 2445066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0365 32 204 AS2 family AT1G07900 65.909 3.15e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan13g0365 LOB 4.5e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0278 7 1783379 1785118 Lan13g0365 13 2443454 2445066 LSH
Lan6g1953 6 30474125 30475630 Lan13g0365 13 2443454 2445066 PCT
Lan10g0123 10 761942 763730 Lan13g0365 13 2443454 2445066 PCT
Lan13g0365 13 2443454 2445066 Lan6g1953 6 30474125 30475630 PCT
Lan13g0365 13 2443454 2445066 Lan10g0123 10 761942 763730 PCT