Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0361 ATGGAACGGTTAATAGATAAGTTTCCATCAATGGATCTGATGCGTTCAGAGAAGATGACATTCGTTCAACTCATCATTCCTGTTGAGTCCGCTCACCGAGCCATGTCCTATTTGGGCGAACTCGGTCTTCTTCAATTCCGTGACTTAAATGACGAAAAAAGCCCATTTCAGAGAACATTTGTTACTCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAACTAAGATTCTTCAAGGATCAAATCAATAAAGCCAGCCTGATGACATTTCCTCCTGTATCGCAGCCCGATATTTTCTTTGAGGATTTAGAGATACAATTGGATGAGCATGAACACGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGCAATCATATAATGAATTACTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGTTTTTCTTGTTTCAAATCATGGCCACACTGTTTTGGAAGAGAGAGAATTAGAGGAGAATGTTTACTCAAATGGAGGCTATGTTGAGACACCATTTTTGTTTGAACAGGAAATGAGACCTGGACCGTCAAATCAATCTGGTTTAAGATTTATCTGCGGGATAATTTGTAAATCCAAAGTTGTAAGGTTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAAGCACCAGCTGATGAACTAATCACCGATCCAATTTCTGGGGAGATGATTGAGAAAACAGTGTTTGTTGTGTTTTTCTCTGGGGAGCAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTCCCTGAAGATATAAGTAAACAAACGCAAATAACTAGGGAGGTTTCTTCACGTCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATTGGAATAAAGCTCTAGCTTCTTTAGGAGATCATTTACCAAAATGGATGGACATGGTAAGAAGAGAGAAAGCAGTGTATGATACACTGAACATGTTAAATGTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGATGGTGCCCTATATTTGCAAAAACGCAGATTCAGGAGACATTGCAGCGTGCAACGTTTGACAGCAATTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCAGTGGAATCACCCCCTACATATTTTAGGACCAATGGTTTCACATATCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACACTACTATTATATTCCCATTTCTTTTTGCGGTAATGTTCGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGAGCATTATTTCTTGTAGCACGTCAAAACAAGCTGAGCACTCAGAAACTAGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATATACAATGAATTCTTCTCTGTTCCTTTCCACATATTTGGTGTGTCTGCTTACAAATGCAGAGATAGTTCATGCAGGGATGCACATACTACTGGCTTAGTGAAATTCCGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCATATGAACTTGGGAATCATGTTAAGTTATTTTAATGCTCATTTTTTTGGTAACTCGGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTGAACAGCCTATTTGGGTATCTTTCCCTTCTCATCGTTGTTAAGTGGTGTACTGGATCTCAGGCGGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCCTTTGACAATCTTGGTGAGAATCAGTTGTTGTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCGGTCCCATGGATGCTCTTTCCAAAACCTTTTATACTAAGGAAGCTTCATAATGAGAGATTTCAAGGACGCAATTATGGTATGCTAAATATCTCTGAGATGGATCTTGAGGCGGAACCAGATTCTGCCAGGCAACGTCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACGCCATTGAGTTTGTTCTAGGCTCAGTTTCAAATACAGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGATAATTTTGCCATTCGATTGTTGGGGCTAGTTGTTTTTGCCTTTGCAACTGCATTTATACTACTTATGATGGAAACTCTGAGTGCTTTTCTTCACGCCCTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTATAAGTTCAGACCTTTTTCCTTTGCCCTCCTCGCAGAGGATGAAGATTGA 2457 0.4009 MERLIDKFPSMDLMRSEKMTFVQLIIPVESAHRAMSYLGELGLLQFRDLNDEKSPFQRTFVTQVKRCAEMSRKLRFFKDQINKASLMTFPPVSQPDIFFEDLEIQLDEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACVFLVSNHGHTVLEERELEENVYSNGGYVETPFLFEQEMRPGPSNQSGLRFICGIICKSKVVRFERMLFRATRGNMLFNQAPADELITDPISGEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQTQITREVSSRLADLEATLDAGIRHWNKALASLGDHLPKWMDMVRREKAVYDTLNMLNVDVTKKCLVGEGWCPIFAKTQIQETLQRATFDSNSQVGIIFHSMDAVESPPTYFRTNGFTYPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALFLVARQNKLSTQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGVSAYKCRDSSCRDAHTTGLVKFREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNAHFFGNSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENQLLWGQRPLQIVLLLLAVIAVPWMLFPKPFILRKLHNERFQGRNYGMLNISEMDLEAEPDSARQRHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNFAIRLLGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALLAEDED* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0361 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Lan13g0361 818 PANTHER VACUOLAR PROTON ATPASES 6 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan13g0361 818 Coils Coil 99 126 - -
Lan13g0361 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lan13g0361 818 PANTHER VACUOLAR PROTON ATPASE A1 6 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0361 Lan-Chr13 2403463 2411856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0361 1 813 Primary Pumps ATPases(2) AT2G28520 78.580 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0361 K02154 - gmx:100800799 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0119 10 723627 735663 Lan13g0361 13 2403463 2411856 PCT
Lan3g0072 3 475935 487202 Lan13g0361 13 2403463 2411856 PCT
Lan13g0361 13 2403463 2411856 Lan10g0119 10 723627 735663 PCT
Lan13g0361 13 2403463 2411856 Lan3g0072 3 475935 487202 PCT