Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0360 ATGGCCGGTGCGAATACGAACGGTGGTGTGGGAGATTTTCCGGCGGTTCCAACGCACGGAGGACAGTATATTCAGTACAATATATTCGGTAATCCGTTCGAGGTTACCACCAAATATCGCCCTCCGATCATGCCGGTTGGTCGTGGTGCCTTTGGAATCGTTTGTTCCCTGTTGAATACGGAGACGAATGAGTTGGTGGCAATTAAGAAGATAGCAAATGCTTTTGATAATTACATGGATGCTAAGCGTACCCTCCGTGAGATTAAGCTTCTTAAGCATTTGGATCATGAAAATATAATTGCTTTAAGAGATGTTATTCCTCCACCTTTGCGAAGAGAGTTTAATGATGTCTACATAGTCACAGAACTCATGGATACCGATCTTCACCACATTATTCGATCCAATCAAAATCTGTCAGAGGAACACTGCCAGTACTTCTTGTATCAGGTTCTTCGTGGATTGAAGTATATACATTCTGCAAACATAATCCATAGAGATTTGAAACCTAGCAACCTGTTGCTGAATGCAAATTGCGACTTGAAGATTATTGATTTTGGTCTTGCACGGCCAGCTATGGAGAGTGACTTCATGACAGAATATGTTGTCACAAGATGGTATAGGGCTCCTGAATTGTTGTTGAACTCCTCAGATTACACTTCTGCCATAGATGTGTGGTCTGTTGGCTGCATTTTTATGGAGCTTATGAATAAAAAGCCTCTGCTTCCGGGTAAAGATCATGTGCATCAGATGCGTCTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCTGACCTGGGGTTAGTGAGAAATGAGGATGTGAGAAGATATATCAGACAACTTCCTCAATATCCTCGCCAACCTTTAGCCAAGGTCTTCCCCCATGTTCACCCCTTAGCCATGGATCTCGTTGATAAAATGTTGACACTTGATCCAACTAAAAGAATTACAGTTGAAGAAGCTCTAGCCCATCCATACCTTGCAAAACTGCATGATGAAGGTGATGAACCAGTCTGCATGGAGCCATTCTCATTTGAATTTGAGCACCAACAATTGGACGAGGAGCAAATAAAAGAGCTGATTTACAGAGAAGCATTGGCACTCAATCCTTAG 1110 0.4279 MAGANTNGGVGDFPAVPTHGGQYIQYNIFGNPFEVTTKYRPPIMPVGRGAFGIVCSLLNTETNELVAIKKIANAFDNYMDAKRTLREIKLLKHLDHENIIALRDVIPPPLRREFNDVYIVTELMDTDLHHIIRSNQNLSEEHCQYFLYQVLRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPAMESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLLPGKDHVHQMRLLTELLGTPTEADLGLVRNEDVRRYIRQLPQYPRQPLAKVFPHVHPLAMDLVDKMLTLDPTKRITVEEALAHPYLAKLHDEGDEPVCMEPFSFEFEHQQLDEEQIKELIYREALALNP* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0360 369 Pfam Protein kinase domain 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0360 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Lan13g0360 369 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0360 369 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Lan13g0360 369 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0360 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Lan13g0360 369 SUPERFAMILY Protein kinase-like (PK-like) 45 332 IPR011009 -
Lan13g0360 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lan13g0360 369 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Lan13g0360 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Lan13g0360 369 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0360 Lan-Chr13 2399053 2402740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0360 5 369 MAP Kinase Gene Family AT3G45640 82.240 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan13g0360 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0360 K20536 - gmx:100801339 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0273 7 1752510 1755430 Lan13g0360 13 2399053 2402740 LSH
Lan8g1692 8 23793634 23796370 Lan13g0360 13 2399053 2402740 LSH