Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0357 ATGAGTTGCTTTTGTTACACAGGGAAATCAACCAAAAAATCGGTGGAGACCAAAGATTATAGCCACACCCACAAGCTCACTAATCACACTACACTAGATAAGGTCAAAGGTGATTTAAAAGTGAATGGGAACAAAGAAGATGGTTATAAGGGAGATCAACTTGCTCTGGATGTAAAGAGTTTAAATATGAAACATGAGGTTTCTGAAGATGGAAAAGATAACGTTAGCAGGGCGCAGTCATTCATCTTCGAAGAACTTGCAGCTGCAACAGGAAATTTTAGATCAGATTGCTTTTTGGGTGAAGGAGGTTTTGGCAAGGTTTACAAAGGGCAATTGGGGAAAATAGATCAGGTTGTAGCTATAAAGCAACTTGACCCTCATGGAGTTCAAGGAATTCGGGAATTTGTTGTTGAAGTGTTGACACTGAGTTTGGCAGATCACACTAACCTTGTCAAATTGATTGGCTTTTGTGCTGAGGGAGAACAAAGGCTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAACCATTTGCTCGATCTTCCCCCCGGTAGAAAACCACTTGATTGGAATACAAGGATGAAAATAGCAGCCGGTGCAGCTAGAGGTTTGGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATTTATCGTGACTTGAAATGCTCTAACATTTTGTTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGTTTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGTACATATGGGTATTGTGCCCCCGATTATGCAATGACAGGTCAGTTAACATTCAAGTCAGATATTTACAGCTTCGGGGTTGTTCTTTTGGAGCTCATCACTGGCAGGAAAGCCATTGACAATACAAAATCTCCCAAAGAGCAAAATCTTGTCGCATGGGCAAGACCCTTATTCAGAGATCGAAAGAAATTCTCACAAATGGTTGATCCATTGCTTGAAGGTAAATATCCGGTGAGAGGATTATACCAAGCTCTTGCTATTGCTGCAATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTTATAGTTGATATCGTTACAGCTCTAAATTACCTTGCTTCCCAGAAGTATGATCCTCAAATTCATCCTGTACAAAGATGTAGAAGTCCATCCTCTCCGAGAGCGAGAAGGGATTGTGATTATAGACATAAACATACTGTTAGTGATGACAGAAATGAAACAGACAGATCTGTAAACTAG 1254 0.4091 MSCFCYTGKSTKKSVETKDYSHTHKLTNHTTLDKVKGDLKVNGNKEDGYKGDQLALDVKSLNMKHEVSEDGKDNVSRAQSFIFEELAAATGNFRSDCFLGEGGFGKVYKGQLGKIDQVVAIKQLDPHGVQGIREFVVEVLTLSLADHTNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLLDLPPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKSPKEQNLVAWARPLFRDRKKFSQMVDPLLEGKYPVRGLYQALAIAAMCVQEQPNMRPVIVDIVTALNYLASQKYDPQIHPVQRCRSPSSPRARRDCDYRHKHTVSDDRNETDRSVN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0357 417 SUPERFAMILY Protein kinase-like (PK-like) 80 397 IPR011009 -
Lan13g0357 417 MobiDBLite consensus disorder prediction 389 417 - -
Lan13g0357 417 Pfam Protein kinase domain 98 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0357 417 Gene3D Phosphorylase Kinase; domain 1 62 169 - -
Lan13g0357 417 CDD STKc_IRAK 99 368 - -
Lan13g0357 417 Gene3D Transferase(Phosphotransferase) domain 1 170 384 - -
Lan13g0357 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lan13g0357 417 PANTHER OS07G0668900 PROTEIN 1 396 - -
Lan13g0357 417 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Lan13g0357 417 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0357 417 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 396 - -
Lan13g0357 417 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0357 417 MobiDBLite consensus disorder prediction 381 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0357 Lan-Chr13 2349021 2352631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0357 59 372 Glycoside Hydrolase AT3G07070 61.709 9.09e-145 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan13g0357 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0357 - - gmx:100811821 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1696 8 23831992 23835766 Lan13g0357 13 2349021 2352631 LSH
Lan6g1960 6 30532900 30536665 Lan13g0357 13 2349021 2352631 PCT
Lan3g0071 3 469551 472522 Lan13g0357 13 2349021 2352631 PCT
Lan13g0357 13 2349021 2352631 Lan6g1960 6 30532900 30536665 PCT
Lan13g0357 13 2349021 2352631 Lan3g0071 3 469551 472522 PCT