Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0334 ATGGAGAGACATAATACTCATAATGAGAATGAAGAAGTGGATATGGGAATGGGAATGGGAATAGGAGGGTCGAGTGGGAGTTCAAGGTGGAACCCTACAAAAGAGCAAATAAGCATGTTGGAGAACTTGTATAAGCAGGGAATAAGAACTCCAAGTGCTGAAGAGATACAACATATAACTGCAAGACTCAAAGTGTATGGTCACATCGAAGGCAAGAATGTCTTCTACTGGTTTCAGAATCACAAGGCCAGGCAAAGACAGAAACAGAAGCAAGAAACTATCGCTTATTTCAATCGCTTTCTTCATAGGCCTCAGCCCATTTTCACTGCACCAATTTGTCCAAATGTTCTCTGTGCTCCATATTGCATGCCACAAACACAAGGTGAAATCAGCTATTATCCACAACATCCAAAGGTGCTTGTACCCGTAGATATTAGGAGAAGCCCCAGAGAGAAATTTTTGCCTATGGGAATGTCAAGTACCTGCAATGACCCACTGGTATATGAAGGCATGCAACCGAGAATCTCTGATTATAACTTGAGCTACAGTAACCAAGAAACGTTGGATCTCTTTCCTGTGCATCCAACTGGCATTTTGGGAAGAAAAACAACACATGACCAGGTTTCATCCCTGGTTTCAGTTTCTTCTGATAGTTCCACTGATACACCTTTTGATTCTTCTGATCATGTCAATGAAGATGGCGATTGTTCTGGAGATAAACCCTTCTTTGATTTTTTTACTTTTGGGCAAGGGTCTCAAGTGAGTGATTGA 771 0.415 MERHNTHNENEEVDMGMGMGIGGSSGSSRWNPTKEQISMLENLYKQGIRTPSAEEIQHITARLKVYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHRPQPIFTAPICPNVLCAPYCMPQTQGEISYYPQHPKVLVPVDIRRSPREKFLPMGMSSTCNDPLVYEGMQPRISDYNLSYSNQETLDLFPVHPTGILGRKTTHDQVSSLVSVSSDSSTDTPFDSSDHVNEDGDCSGDKPFFDFFTFGQGSQVSD* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0334 256 Gene3D - 27 95 - -
Lan13g0334 256 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Lan13g0334 256 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 248 IPR044555 GO:0003700|GO:0099402
Lan13g0334 256 MobiDBLite consensus disorder prediction 210 236 - -
Lan13g0334 256 CDD homeodomain 29 89 IPR001356 GO:0003677
Lan13g0334 256 MobiDBLite consensus disorder prediction 210 225 - -
Lan13g0334 256 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 15 248 - -
Lan13g0334 256 SUPERFAMILY Homeodomain-like 20 94 IPR009057 -
Lan13g0334 256 Pfam Homeodomain 28 87 IPR001356 GO:0003677
Lan13g0334 256 SMART HOX_1 25 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0334 Lan-Chr13 2198152 2200238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0334 22 252 Wox Gene Family AT5G59340 42.085 3.02e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan13g0334 Homeodomain 5.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0334 - - pvu:PHAVU_011G064900g 323.553