Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0320 ATGGATCCCTTTTCCAATTCCAATTTTAGTTTCAACCAATTGCCCTATGTACAGAATCAATACACTGAAGACCCATCATCCATCAACTTTGGTTTCATGAATCATAACCCTTTTCTCCTTCCACCTTATCATCCAATCATTCCTCAAAACCCTTCTTCTTCCATGCCCACAGTTACCAATACTACTACTACTACTACTACTACTGATGAAGATTCTCCCTTGGATGATGAGGCTGAATTCTCTGCAACCATGCTACGTTACATTAATCAAATGCTAATGGAAGAAGACATGGAAGAGAAACCTTGTATGTTCCATGATTCTTTGGCTCTTCAAGCTGCTGAGAAATCTTTGTATGAGGTCATTGGTGAGACATACCCGTCTTCTTCGGTTCGAAACTATCACAATTTGGATAGCCCTGGTGATAGTTTCTCTAGCAACTTCAGTGGTTATAGCAGTTTTGGTACTGCTAGTACAAGCAACTCGGTTGATCCTACTTACTTGAGTCATGTTGATCTTGGAGACTATACGGCTTCTATACCGCAAACAAGTTTTGATCGTGACTTTGTTTTTAAGGCGAGTTCAATCTCGACTAATCGATTGTCAATGAACAATAATGGATTCTTGGGAAGTTCTAGGGATTGTTTTTTAGATTCAAAATTGTTTAGTAAGAGTGAGTCAGTGCTGCAATTTGAGAGAGGTGTTGAGGAAGCTAGTAAGTTTCTGCCTAAAGCGAATCCGTTGGTCATTGACTTGGAGAACAACATATTTACCCCGTCTTTACAAAATGGTCCCAAGCAGGCGGTGATTAAGATGGAGAGAGATGAAAGAGAGCATTTGTCAGCTGAGTCAAGAGGTAGGAAAAATCACGAGCGAGAAGATGAATCAGATTTGGGAGATGGAAGAAGCAGCAAACAATCTGCAGTTTATAGGGATGAGAGTGAAGAGCTATCTGAATTATTTGATAAGGTGCTGCTAGGTAGAGTGTGTGGAAATAACGGAACTCCTTTGTGTATTCTCAACGAAGACCACAATAATAATGGACCAGAGACTAGTATCCAGAAAAATGAAGAACCAAACAGGTCTGGTAGTGGAAAGAATCGTACTAAGAAACAAGGCAATAAGAAGGGAGTTGTGGATTTGAGAACACTATTGGTTATGTGTGCACAAGCTGCTTCTTCTGATGATCGCGTAACTGCTAACGACTTATTAAAGCAGATCAGGCAACATTCTTCCCTGCAGGGTGATGGTTCTCAGAGGCTGGCACATTGCTTTGCAAATGCCCTTCAAGCACGCTTGGCGGGTACTGGCACTCAGATTTATACTGCTTTGTCCTCCAAGAGAACCTCTGCTGCGGACGTGGTTAAAGCTTACCAAATGTATATTTCAGCCTGTCCATTTAAGAAGCTTTCACTCATCTTTGCAAACCATACAATTTTGAGTCTAGCCAGACCCAAGGAAGTGGAAACTCTTCATATTGTAGATTTTGGTATCCGTTATGGCTTCCAGTGGCCTGCCCTTATTGTTCGTCTATCAAAACGACCTGGTGGTCCTCCCAAGCTGCGCATGACAGGGATAGAGCTACCACAACCTGGTTTCAGGCCAGCACAGAGCGTCGAGGAGACAGGGCGTCGCCTAGCAAAGTATTGTGATCGATTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACCTGAAGATAAAGGAAAATGAACTTCTTGTTGTGAATTGTATGGTACGGTTCAAAAATCTACTTGATGAAACAGTTGTTTTGAATAGTCCCAGGGACGCTGTTCTAAACTTAATTAGGAAGGCAAATCCCAGTATCTTTATACATACTACTGTCAATGGGAGCTACAGTGTGCCATTCTTTGTGACACGGTTCCGCGAGGCTCTTTTCCATTACTCTACATTGTTTGATGTTCTTGACACGAATACTGCTCGTGAAGATCCTATGAGGTTGATGTTTGAGAAGGAGTTCTTTGGGCGAGAGGTAATGAATATTATAGCCTGTGAGGGTACTGAGAGGGTTGAGAGGCCCGCGACATACAAGCAATGGCAGGTTCGGAACATGAGGGCTGGATTTAGGCAACTGCCATTGGATCACCATCTTATTAACAAATTAAGGTGCAAGATGAAAGATGTGTACCACAGTGATTTTATGCTTGTTGAAGATGGCAACTGCATGCTGCAAGGGTGGAAAGGCCGAATCATTTATGCTTCTTCCTGTTGGGTACCCGCATAG 2268 0.4228 MDPFSNSNFSFNQLPYVQNQYTEDPSSINFGFMNHNPFLLPPYHPIIPQNPSSSMPTVTNTTTTTTTTDEDSPLDDEAEFSATMLRYINQMLMEEDMEEKPCMFHDSLALQAAEKSLYEVIGETYPSSSVRNYHNLDSPGDSFSSNFSGYSSFGTASTSNSVDPTYLSHVDLGDYTASIPQTSFDRDFVFKASSISTNRLSMNNNGFLGSSRDCFLDSKLFSKSESVLQFERGVEEASKFLPKANPLVIDLENNIFTPSLQNGPKQAVIKMERDEREHLSAESRGRKNHEREDESDLGDGRSSKQSAVYRDESEELSELFDKVLLGRVCGNNGTPLCILNEDHNNNGPETSIQKNEEPNRSGSGKNRTKKQGNKKGVVDLRTLLVMCAQAASSDDRVTANDLLKQIRQHSSLQGDGSQRLAHCFANALQARLAGTGTQIYTALSSKRTSAADVVKAYQMYISACPFKKLSLIFANHTILSLARPKEVETLHIVDFGIRYGFQWPALIVRLSKRPGGPPKLRMTGIELPQPGFRPAQSVEETGRRLAKYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELLVVNCMVRFKNLLDETVVLNSPRDAVLNLIRKANPSIFIHTTVNGSYSVPFFVTRFREALFHYSTLFDVLDTNTAREDPMRLMFEKEFFGREVMNIIACEGTERVERPATYKQWQVRNMRAGFRQLPLDHHLINKLRCKMKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWVPA* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0320 755 MobiDBLite consensus disorder prediction 340 359 - -
Lan13g0320 755 MobiDBLite consensus disorder prediction 49 74 - -
Lan13g0320 755 PANTHER SCARECROW-LIKE PROTEIN 14 58 754 - -
Lan13g0320 755 ProSiteProfiles GRAS family profile. 371 753 IPR005202 -
Lan13g0320 755 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 754 IPR005202 -
Lan13g0320 755 MobiDBLite consensus disorder prediction 340 373 - -
Lan13g0320 755 Pfam GRAS domain family 380 752 IPR005202 -
Lan13g0320 755 MobiDBLite consensus disorder prediction 50 69 - -
Lan13g0320 755 MobiDBLite consensus disorder prediction 274 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0320 Lan-Chr13 2103452 2106323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0320 84 755 GRAS Transcription Factor Family AT1G07530 55.427 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g0320 GRAS 7.8e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0320 - - ahf:112736647 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0090 10 532829 535951 Lan13g0320 13 2103452 2106323 PCT
Lan3g0052 3 350567 353108 Lan13g0320 13 2103452 2106323 PCT