Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0319 ATGCTTTCTACAGATTCCTTTCTGGAAAACTTTCCTGGTTCTGTGAATGGATTTAAATTTGAAAATGGTCCTAGTTCAGTATATACATATCAGAACTCAGGAAATGGGTTTAAAGTGGAAGATTCTTCTTCCCCTTCAAACCATTCAGAATCTCCCACTGATTCTGGTCCTTCTTCTATCTCAAATAGAAAATCTGCTGATTCTACTATACATTCCAATCCTATTTTGAGATACATTAGTGATATCCTCATGGATGAAGAAGATGACTTGGAGCGCAAACCATGCATGTTGCAGGATTGTTTGAAACTCCAGGCTGCTGAAAAATCATTCTATGACGCGCTTGGTCATAGCTATCCTTCATCACCGAACCAAATCCAAGGTTGTTTCCAACAAGATAGTTCTGACCCTGATGATAATTCATGTAGAACTATTAGTTATGACAGCAATAGCAGCTACACCACTGATCACTCATCATTATATGAGTCTGATTGGGTTTATGGTGCTGCTGATTTTGAGTCTTCTTTCATGTATACGCGTAACTCTCTACTTGATGATGTAGCTCTTGATCCATTTAGAGAGATACAAGCTCTTGGAACCTGGAATAATTTTATTCAGTCTCAGATCAAGCCACATACAATTGAAGCAACCATAGGATCAGGGGAAAAAAGAGTCCATCATATGGATGATATCTCAATTGAAGAAAAAGAGAGAGTAAGCAAGGTTTCTGCTATATACTCTGATGATTTAGAACCATCAGACATGTTTGATGAGGTACTGCTTTGTAAGGAAGGAAAAAGTCCTGCCATTTTTTGTGCCGATCATGAATCATCACAACAGAATGTTGCTGATTCAAGAGGATCTAATGGAAAAGCGACGCGTACAAAGAAAGGTGGCAAAAAGGGGACAAGTACAAGTACAACTGTAGATTTATGGACTCTTCTAACTCAGTGTGCACAAGCAGTAGCAAACTATGATCAAAGGAATGCAAATGAAATACTCAATCAGATTAAGCAGCACTCTTCAGCTTTTGGTGATGGACTACAGCGTTTAGCTCATTACTTTGCCATTGGTCTCAACCTCAAGACACGATTAGCTGCTGGGACACCAAAGTATATGCAACTTCATCTAGCATCTGCTGCAGATATGTTGAAAGCTTACAAGTTATACATTACAGCATCTCCATTTCAGAGCATGTCAAATTTCTTGGCTAACAGAACTATTCTGAAGCTAGCAGAAAATGAGAGCAGCCTTCACGTTATTGACATCGGCGTTGGGTATGGTTTCCAATGGCCTTGCCTCATCCAACGTCTTTCGGAAAGACCAGGCGGGCCTCCGAAGCTACGAATCACAGGAATTGACCTTCCTCAACCAGGATTTCGGCCTGCGGAAAGGGTTGAGGAGACGGGGAGGCGACTAGAAAATTACTGCGAGAGGTTCAAAGTGCCATTTGAGTACAATTGCCTTGCACAGAAATGGGAGACCATAAGTCTTGAGGATCTCAAGATTGATAGGAATGAAGTAATAGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTTTGATGAAACTGTGAATGTTAACTGTCCCAGAGATGCTGTATTAAGGTTGATCAGGAAGATTAATCCAAACATGTTCATACATGGGGTTGTTAATGGCACTTACAATGCACCATTTTTCTTGACAAGGTTCAAGGAAGCACTCTTTCACTTCTCAGCATTGTTTGATATGTTCGAGGCTAATGTGTCGCGTGAGGATCCACATAGGCTGATGCTTGAGAAAGGGTTGATTGGAAGGGATGCAATCAATGTTATAGCATGTGAAGGCACAGAGAGGGTTGAAAGGCCAGAGACTTATAAGCAGTGGCAGGTTAGGAACCGGAGAGCAGGGTTCAAGCAAATTTCATTGGCTCCAGAACTACTGAATAGAGTCAAAGAGATGGTGAAGAATGAACATCATAAGGATTTTGTAGTGAGTGAGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGCATGCTCTTTCTTCTTGGGTTCCTGCTTAA 2049 0.4114 MLSTDSFLENFPGSVNGFKFENGPSSVYTYQNSGNGFKVEDSSSPSNHSESPTDSGPSSISNRKSADSTIHSNPILRYISDILMDEEDDLERKPCMLQDCLKLQAAEKSFYDALGHSYPSSPNQIQGCFQQDSSDPDDNSCRTISYDSNSSYTTDHSSLYESDWVYGAADFESSFMYTRNSLLDDVALDPFREIQALGTWNNFIQSQIKPHTIEATIGSGEKRVHHMDDISIEEKERVSKVSAIYSDDLEPSDMFDEVLLCKEGKSPAIFCADHESSQQNVADSRGSNGKATRTKKGGKKGTSTSTTVDLWTLLTQCAQAVANYDQRNANEILNQIKQHSSAFGDGLQRLAHYFAIGLNLKTRLAAGTPKYMQLHLASAADMLKAYKLYITASPFQSMSNFLANRTILKLAENESSLHVIDIGVGYGFQWPCLIQRLSERPGGPPKLRITGIDLPQPGFRPAERVEETGRRLENYCERFKVPFEYNCLAQKWETISLEDLKIDRNEVIVVNCLYRLKNLFDETVNVNCPRDAVLRLIRKINPNMFIHGVVNGTYNAPFFLTRFKEALFHFSALFDMFEANVSREDPHRLMLEKGLIGRDAINVIACEGTERVERPETYKQWQVRNRRAGFKQISLAPELLNRVKEMVKNEHHKDFVVSEDGKWVLQGWKGRILHALSSWVPA* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0319 682 MobiDBLite consensus disorder prediction 122 155 - -
Lan13g0319 682 MobiDBLite consensus disorder prediction 31 67 - -
Lan13g0319 682 ProSiteProfiles GRAS family profile. 301 680 IPR005202 -
Lan13g0319 682 MobiDBLite consensus disorder prediction 275 304 - -
Lan13g0319 682 Pfam GRAS domain family 312 679 IPR005202 -
Lan13g0319 682 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 681 IPR005202 -
Lan13g0319 682 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0319 Lan-Chr13 2098090 2100837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0319 6 681 GRAS Transcription Factor Family AT2G29060 44.620 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan13g0319 GRAS 6.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0319 - - gmx:100815586 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1984 6 30718938 30722191 Lan13g0319 13 2098090 2100837 PCT
Lan10g0089 10 527420 529616 Lan13g0319 13 2098090 2100837 PCT
Lan13g0319 13 2098090 2100837 Lan10g0090 10 532829 535951 PCT
Lan13g0319 13 2098090 2100837 Lan3g0052 3 350567 353108 PCT