Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0310 ATGGAGCAAATGGAACATGATAAAGTGCCTATCTTGGAAGGAAGATCCAGCCAGGAAATTGAGATACCCATCATTTCTGAGAGACTTGAAGTTGTTCATAAAACAATGGAATCATATTGCAATTCTGTTTGTGCTTTTTCCAAACAAGAAAACAGTGCGGCAGCATCAGAAGAGTCAGCAAAATTGGCAAAGAAGCTTTGTGGACTCATAGTTTTCTATACTATTGTAATGCTTGTGGAAATTGTGGGTGGTATAAAAGCTAACAGTTTAGCAGTCATCAGTGATGCAGCACACTTGCTTTCTGATATCGCCGGATTCTTAATCTCTCTCTTTGCAGTTTGGGCTTCAGACTGGGAGGCAACACTAGATCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGTGCATTTTTGTCTTTGCAGTTAATTTGGTTTATATCTGGTTTTTTGATTTATGAAGCAGTTGGTAGAATTCTCATTCGAAATTCCGAGGTGAATGGCATGCTCATGTTTGGAATTGCAGCATTTGGGTTTGTTCTTAATTTTATAATGGTTGTGTGGCTTGGTCATGATCATCACCATCATCATGGCTTCGGAGTCTCAGATCATAATCATAGTCATCATCACCATCATCATGGCCATGGAGACTCGGTTAACGATCACAGTCATCATCATGGCCATGGAGACTCAAATAATGATCATGGTCATCATCATGACCATGGAGACTTGGATAACGATCATGGTCACCATCATTGCAGTGAACACTCAAATCATGATCATGAGAAGGGGGAACTACCTAAAATAAATGATGAGGAGAAACTTGACCTGCTTTCAAGTGATCATAGTAATAGTAATAATGTCTTGAACATAAATCTACAAGGGGCTTATTTGCATGTCATGGTTGATATGATCCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTAAACCAGAATGGTTAATGGTTGATCTTATGTGCACTCTTATATTTTCTGTCATATCTTTGAGTACTACTGTGCCGATGCTTAGGAATATTTATGGCATTTTGATGGAGAGAACACCAAGAGGGATAAATATCATTAATCTGGAAGATGGGCTCAGAAGTATCAAAGGAGTGCAGGATATTCATGATTTGCATGTTTGGTCCATAACAGCTGGAAAAAATGTTCTGTCTTGCCATGTAGTAGCTGAGTCTGGGATCAGTTCCATTGACTTACTTGGCAAGATTAAGTATTACTGCAAAAATACACATAAAATACAACATGTAACTATACAAATAGAGTAA 1293 0.3844 MEQMEHDKVPILEGRSSQEIEIPIISERLEVVHKTMESYCNSVCAFSKQENSAAASEESAKLAKKLCGLIVFYTIVMLVEIVGGIKANSLAVISDAAHLLSDIAGFLISLFAVWASDWEATLDQSFGYNRLEVLGAFLSLQLIWFISGFLIYEAVGRILIRNSEVNGMLMFGIAAFGFVLNFIMVVWLGHDHHHHHGFGVSDHNHSHHHHHHGHGDSVNDHSHHHGHGDSNNDHGHHHDHGDLDNDHGHHHCSEHSNHDHEKGELPKINDEEKLDLLSSDHSNSNNVLNINLQGAYLHVMVDMIQSVGVMIAGAIIWAKPEWLMVDLMCTLIFSVISLSTTVPMLRNIYGILMERTPRGINIINLEDGLRSIKGVQDIHDLHVWSITAGKNVLSCHVVAESGISSIDLLGKIKYYCKNTHKIQHVTIQIE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0310 430 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 235 430 - -
Lan13g0310 430 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 223 - -
Lan13g0310 430 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 365 430 IPR036837 -
Lan13g0310 430 MobiDBLite consensus disorder prediction 199 264 - -
Lan13g0310 430 SUPERFAMILY Cation efflux protein transmembrane domain-like 65 354 IPR027469 -
Lan13g0310 430 Pfam Cation efflux family 70 353 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lan13g0310 430 TIGRFAM CDF: cation diffusion facilitator family transporter 66 430 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lan13g0310 430 Gene3D Cation efflux protein transmembrane domain 62 352 IPR027469 -
Lan13g0310 430 MobiDBLite consensus disorder prediction 213 264 - -
Lan13g0310 430 PANTHER METAL TOLERANCE PROTEIN B 4 223 - -
Lan13g0310 430 PANTHER METAL TOLERANCE PROTEIN B 235 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0310 Lan-Chr13 2031730 2034556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0310 44 430 Inorganic Solute Cotransporters AT2G46800 46.253 4.46e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0310 K14689 - gmx:100777590 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0220 7 1367571 1369519 Lan13g0310 13 2031730 2034556 LSH