Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0305 ATGGGAGCACGTTGTTCTAAATTCTCTCTCTGTTGGTGGTCTTCTAATATCAAATCCAACCTTCATGACTTGTCTGATAATGATGATGGGAGTAAGAATGATAAGGATCCTTTTGCTGGGTTCATTGAGTACACCTTGGATCAACTCAAAGTTGCTACTTCAGGATTTTCACCTGACAACATTGTTTCAGAACATGGTGAAAAGGCTCCTAATGTTGTCTACAAAGGAAGACTTCAAGATGATAGATTGGTTGCTGTGAAGCGTTTCAACAAGTCAGCTTGGCCTGATTCACGCCAATTCATAGAGGAAGCAAGAGCTGTGGGGCTATTGAGGAATGAAAGATTAGCTAACTTGGTTGGGTTTTGCTGTGAAGGAGAAGACAAATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTATCCAAACATCTTTTTCACTGGGAGAGCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTAGCATTGTATCTAGCACAAGCACTTGAATACTGCAGCAGTAATGGAAGAGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGATGGCAATCCTAGACTCTCTTGCTTCGGACTCATGAAAAACAGTAGAGATGGAAGAAGCTATAGTACAAATTTAGCCTTCACTCCTCCAGAATACTTGAGGACAGGAAGAATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACCCTTTTGCTTGATCTTATGAGTGGAAAGCATATCCCACCCAGTCATGCCCTTGACCTTATACGAGCCAAAAATTTCCAATTGCTGATGGACTCAGGTTTGGAAGGTCATTTCTCAAATGATGATGGAACTGAGTTAGTGAGACTAGTTTCACGTTGTTTACAATTTGAACCCCGTGAGAGACCAAATGCCAAGTCGCTTGTGACTGCTCTAACTCCACTTCAGAAAGAAACTTCAGTATCATCATACTGTTTGATGGGAATTACAGAAGCAGGTGTATCACCGAAGGAAACAGTTTCCTTGACGCCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTGACCGCATTGCATGAAATGTTGGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAGATGTGGACAAATCAAATACAAGATACACTAAACTTTAAGAAGCATGGAGATTCTGCTTTTCATGCCATGGACTTCTCTAGGGCCATTGACTGCTACACACAATTCATCGAAAGTGGGACAATGGTATCACCAACGGTTTACGCGAGGCGCTGCTTATGCTACATGATGAGTAACATGCCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAGTCTGTATTTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGCTGCCCTTTTCAGCCTTGGCATGGACAATGATGCACAAGAAAGTCTTAAAGATGGCACAATGTTGGAGACCAGAAAACATAGAAATTGA 1476 0.4241 MGARCSKFSLCWWSSNIKSNLHDLSDNDDGSKNDKDPFAGFIEYTLDQLKVATSGFSPDNIVSEHGEKAPNVVYKGRLQDDRLVAVKRFNKSAWPDSRQFIEEARAVGLLRNERLANLVGFCCEGEDKLLVAEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSNGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLMSGKHIPPSHALDLIRAKNFQLLMDSGLEGHFSNDDGTELVRLVSRCLQFEPRERPNAKSLVTALTPLQKETSVSSYCLMGITEAGVSPKETVSLTPFGEACSRRDLTALHEMLDKVGYKDDEDVANELSFQMWTNQIQDTLNFKKHGDSAFHAMDFSRAIDCYTQFIESGTMVSPTVYARRCLCYMMSNMPQEALGDAMQAQSVFPTWPTAFYLQAAALFSLGMDNDAQESLKDGTMLETRKHRN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0305 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Lan13g0305 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lan13g0305 491 SUPERFAMILY Protein kinase-like (PK-like) 37 314 IPR011009 -
Lan13g0305 491 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0305 491 Gene3D Tetratricopeptide repeat domain 384 490 IPR011990 GO:0005515
Lan13g0305 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Lan13g0305 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Lan13g0305 491 SUPERFAMILY TPR-like 384 480 IPR011990 GO:0005515
Lan13g0305 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0305 Lan-Chr13 1999602 2003499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0305 44 310 Glycoside Hydrolase AT3G07070 33.559 9.62e-40 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan13g0305 PK_Tyr_Ser-Thr 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0305 - - gmx:732542 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0216 7 1348852 1353139 Lan13g0305 13 1999602 2003499 LSH