Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0303 ATGGACTTGAAGTCAAATCATACACCTGTTCTCACTGATTCCGCTGCACCCATAAATATAACAAAGTCAAGACTGGGTGTGCATTCTAGTTTGTTGCCTTACTCCCCTACTGGGACAACCATTCCACACGGTATGTTATTGACTATCCCAAGGAAGAAGGCCGGATTTCTTGAAGATGTTCGTTCCAGTGGTTGGTTGGATGCCATGAAATCATCTTCTCCTCCACCCAGAAAGATAACAAAGGATGTTAGTCATGGGTTTGCATCATCTGAAGCCGACTCTTCTTATTTTTCCTGGCTGCTAAAGTATCCATCAGCACTTACATCTTTTGAGCAAATCACAAACTATGCAAAAGGAAAGAGAATAGCACTGTTTCTGGATTACGATGGAACTCTTTCACCAATTGTGGATAACCCTGACTGTGCTTTTATGTCTGACAATATGCGTGCTGCCGTTAAAAGGGTTGCAGAGTATTTTCCGACAGCTATAATCAGTGGAAGAAATCGTGACATGGTGTATGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCACGGGATGGACATCATGTGCCCGGTTAAGTCTACTAACAAGCAAAAGCAGGATAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCCATGATTGACGAGGTATTTAGGTCACTCGTCGAGACTACTAAAGACATTAAAGGAGCAAAAGTTGAAAACAATAAGTTTTGTGCCTCTGTACATTACCGCAATGTAGATGAAAAGAATTGGGATTTGGTGGGGCAATGTGTCCATGATGTCTTGAAGGGCTATCCACGTTTGCGTTTAACTCACGGGCGGAAGGTTTTAGAGGTCCGACCTGTGATTAACTGGGATAAGGGAAAAGCTGTCACATTTATACTTGAGTCACTTGGACTTGCCAATTGTGACGACGTGCTTCCCATATATATTGGAGATGACCGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAAGGAAATAAAGGTTATGGGATCTTAGTGTCTTCAGCACCAAAGCAAAGCAATGCAAATTACTCTCTACGTGATCCATCAGAGGTCATGGAATTTCTTAAGTCACTTGTGTTATGGAGGTCAAATCTAGCCCTATGA 1134 0.4198 MDLKSNHTPVLTDSAAPINITKSRLGVHSSLLPYSPTGTTIPHGMLLTIPRKKAGFLEDVRSSGWLDAMKSSSPPPRKITKDVSHGFASSEADSSYFSWLLKYPSALTSFEQITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKRVAEYFPTAIISGRNRDMVYEFVGLTELYYAGSHGMDIMCPVKSTNKQKQDKEVNLFQPAAEFLPMIDEVFRSLVETTKDIKGAKVENNKFCASVHYRNVDEKNWDLVGQCVHDVLKGYPRLRLTHGRKVLEVRPVINWDKGKAVTFILESLGLANCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKQSNANYSLRDPSEVMEFLKSLVLWRSNLAL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0303 377 Gene3D - 213 289 - -
Lan13g0303 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 374 IPR044651 GO:0004805|GO:0005992
Lan13g0303 377 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 332 IPR006379 -
Lan13g0303 377 CDD HAD_TPP 123 363 - -
Lan13g0303 377 SUPERFAMILY HAD-like 123 372 IPR036412 -
Lan13g0303 377 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE A 1 374 - -
Lan13g0303 377 TIGRFAM T6PP: trehalose-phosphatase 119 369 IPR003337 GO:0003824|GO:0005992
Lan13g0303 377 Pfam Trehalose-phosphatase 125 359 IPR003337 GO:0003824|GO:0005992
Lan13g0303 377 Gene3D - 124 355 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0303 Lan-Chr13 1972632 1977974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0303 116 368 Trehalose Biosynthesis Gene Families AT1G70290 27.737 7.76e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0303 K01087 - gmx:100819495 640.573