Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0301 ATGGATTGGATTGGGAGCTCAAGTGAACTCTTTGTTCCTCCACCTTTGTCTTCTTCATTAAACTCCCTCTACAACTATGATTACACAACATATCCAGTTATGGAAATGAAGCAACAAACAGTATTGGTTGATGAGACACATGAAGAAGAGGAGAAGAAGGGGAAGAAGAAGCGATTAACAAGTGTTCAGGTTGAATCACTGGAAAGGGGTTTTCAGGAGGGTATGAAGTTGGAGCCTGATAAGAAGATGAAGCTTTCCAAGGAGTTAGGGCTTGAGCCTCGCCAAATTGCTATTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGGTTAACCAACTCAAACACCACTTTGATGTCATCATGAAGGAAAACCAGAAGCTTCACCAAGAGGTTATGAATTTGAAGGCTATGATGAGTGACCATGCTTCTACTAGGAAACAGATATCAGCAAGTTATGCAGAAATCTGTGAGGAACAAACAGCAGAAAGCGTATCTGCAATGATGCATTATCAGCAAAATGTTATTGCGGATCAGGGAAACTATTCTTTCACCATGCAAGAATATTATAACATGATTCCAATGCTGCAACCCTACCCTGCTGCTTTTTCCAATAATTAG 615 0.4081 MDWIGSSSELFVPPPLSSSLNSLYNYDYTTYPVMEMKQQTVLVDETHEEEEKKGKKKRLTSVQVESLERGFQEGMKLEPDKKMKLSKELGLEPRQIAIWFQNRRARWKVNQLKHHFDVIMKENQKLHQEVMNLKAMMSDHASTRKQISASYAEICEEQTAESVSAMMHYQQNVIADQGNYSFTMQEYYNMIPMLQPYPAAFSNN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0301 204 CDD homeodomain 58 111 IPR001356 GO:0003677
Lan13g0301 204 Pfam Homeodomain 55 108 IPR001356 GO:0003677
Lan13g0301 204 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 193 - -
Lan13g0301 204 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Lan13g0301 204 SMART HOX_1 52 114 IPR001356 GO:0003677
Lan13g0301 204 PRINTS Lambda-repressor HTH signature 81 90 IPR000047 GO:0003677
Lan13g0301 204 PRINTS Lambda-repressor HTH signature 90 106 IPR000047 GO:0003677
Lan13g0301 204 SUPERFAMILY Homeodomain-like 46 109 IPR009057 -
Lan13g0301 204 Gene3D - 25 111 - -
Lan13g0301 204 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 193 IPR045224 GO:0003700
Lan13g0301 204 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0301 Lan-Chr13 1956439 1958898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0301 11 133 Homeobox Transcription Factor Family AT5G03790 44.218 1.25e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan13g0301 Homeodomain 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0301 - - lang:109363497 371.318